Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.85■□□□□ 0.45
APOA4P06727 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.85■□□□□ 0.45
APOA4P06727 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
APOA4P06727 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
APOA4P06727 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.85■□□□□ 0.45
APOA4P06727 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
APOA4P06727 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.85■□□□□ 0.45
APOA4P06727 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
APOA4P06727 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.85■□□□□ 0.45
APOA4P06727 AC108860.2-201ENST00000562760 2183 ntBASIC17.85■□□□□ 0.45
APOA4P06727 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.85■□□□□ 0.45
APOA4P06727 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.85■□□□□ 0.45
APOA4P06727 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
APOA4P06727 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
APOA4P06727 AL138688.1-201ENST00000624851 1594 ntBASIC17.85■□□□□ 0.45
APOA4P06727 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.85■□□□□ 0.45
APOA4P06727 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.85■□□□□ 0.45
APOA4P06727 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOA4P06727 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.85■□□□□ 0.45
APOA4P06727 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
APOA4P06727 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
APOA4P06727 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.84■□□□□ 0.45
APOA4P06727 AC141586.5-201ENST00000624546 2050 ntBASIC17.84■□□□□ 0.45
APOA4P06727 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.84■□□□□ 0.45
APOA4P06727 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
APOA4P06727 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.84■□□□□ 0.45
APOA4P06727 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 AC113404.2-201ENST00000507884 177 ntBASIC17.84■□□□□ 0.45
APOA4P06727 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.84■□□□□ 0.45
APOA4P06727 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.84■□□□□ 0.45
APOA4P06727 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.84■□□□□ 0.45
APOA4P06727 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.84■□□□□ 0.45
APOA4P06727 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
APOA4P06727 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.84■□□□□ 0.45
APOA4P06727 HYMAI.1-201ENST00000620949 238 ntBASIC17.84■□□□□ 0.45
APOA4P06727 AL590326.2-201ENST00000625139 305 ntBASIC17.84■□□□□ 0.45
APOA4P06727 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
APOA4P06727 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
APOA4P06727 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.84■□□□□ 0.45
APOA4P06727 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.84■□□□□ 0.45
APOA4P06727 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOA4P06727 AC133963.1-201ENST00000504166 1679 ntBASIC17.83■□□□□ 0.45
APOA4P06727 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.83■□□□□ 0.45
APOA4P06727 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOA4P06727 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.83■□□□□ 0.45
APOA4P06727 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.83■□□□□ 0.45
APOA4P06727 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOA4P06727 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
APOA4P06727 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOA4P06727 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
APOA4P06727 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
APOA4P06727 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOA4P06727 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOA4P06727 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOA4P06727 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOA4P06727 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOA4P06727 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APOA4P06727 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.83■□□□□ 0.44
APOA4P06727 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.83■□□□□ 0.44
APOA4P06727 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.83■□□□□ 0.44
APOA4P06727 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOA4P06727 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.83■□□□□ 0.44
APOA4P06727 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.83■□□□□ 0.44
APOA4P06727 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOA4P06727 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
APOA4P06727 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
APOA4P06727 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.83■□□□□ 0.44
APOA4P06727 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APOA4P06727 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.83■□□□□ 0.44
APOA4P06727 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOA4P06727 PP12613-201ENST00000424958 2230 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms