Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.35■■□□□ 1.01
CHGBP05060 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHGBP05060 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHGBP05060 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHGBP05060 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.35■■□□□ 1.01
CHGBP05060 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CHGBP05060 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.34■■□□□ 1.01
CHGBP05060 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CHGBP05060 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 COX5BP2-201ENST00000392354 334 ntBASIC21.34■■□□□ 1.01
CHGBP05060 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.34■■□□□ 1.01
CHGBP05060 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.34■■□□□ 1.01
CHGBP05060 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.34■■□□□ 1.01
CHGBP05060 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.34■■□□□ 1.01
CHGBP05060 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CHGBP05060 AC019129.2-201ENST00000609837 1235 ntBASIC21.34■■□□□ 1.01
CHGBP05060 REXO1L6P-202ENST00000619970 1078 ntBASIC21.34■■□□□ 1.01
CHGBP05060 TP73-AS1-207ENST00000624167 988 ntBASIC21.34■■□□□ 1.01
CHGBP05060 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.34■■□□□ 1.01
CHGBP05060 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHGBP05060 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.33■■□□□ 1.01
CHGBP05060 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.33■■□□□ 1.01
CHGBP05060 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CHGBP05060 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.33■■□□□ 1.01
CHGBP05060 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 AL049757.1-201ENST00000616842 1596 ntBASIC21.33■■□□□ 1.01
CHGBP05060 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.33■■□□□ 1.01
CHGBP05060 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
CHGBP05060 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
CHGBP05060 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.33■■□□□ 1.01
CHGBP05060 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 AC004817.3-201ENST00000602957 2129 ntBASIC21.33■■□□□ 1.01
CHGBP05060 AC104692.2-201ENST00000603054 253 ntBASIC21.33■■□□□ 1.01
CHGBP05060 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.33■■□□□ 1.01
CHGBP05060 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHGBP05060 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.33■■□□□ 1.01
CHGBP05060 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.33■■□□□ 1
CHGBP05060 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHGBP05060 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHGBP05060 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CHGBP05060 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CHGBP05060 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHGBP05060 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.33■■□□□ 1
CHGBP05060 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CHGBP05060 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CHGBP05060 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.32■■□□□ 1
CHGBP05060 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.32■■□□□ 1
CHGBP05060 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CHGBP05060 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CHGBP05060 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHGBP05060 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.32■■□□□ 1
CHGBP05060 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.32■■□□□ 1
CHGBP05060 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.32■■□□□ 1
CHGBP05060 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.32■■□□□ 1
CHGBP05060 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.32■■□□□ 1
CHGBP05060 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.32■■□□□ 1
CHGBP05060 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.32■■□□□ 1
CHGBP05060 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.32■■□□□ 1
CHGBP05060 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.32■■□□□ 1
CHGBP05060 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.32■■□□□ 1
CHGBP05060 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHGBP05060 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CHGBP05060 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHGBP05060 PP12613-201ENST00000424958 2230 ntBASIC21.32■■□□□ 1
CHGBP05060 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms