Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CD74P04233 MFAP1P1-201ENST00000442257 1255 ntBASIC14.97□□□□□ -0.01
CD74P04233 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CD74P04233 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.97□□□□□ -0.01
CD74P04233 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.97□□□□□ -0.01
CD74P04233 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CD74P04233 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 PKD1P1-201ENST00000458669 6805 ntBASIC14.97□□□□□ -0.01
CD74P04233 LINC00167-201ENST00000530583 1419 ntBASIC14.97□□□□□ -0.01
CD74P04233 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CD74P04233 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.97□□□□□ -0.01
CD74P04233 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.97□□□□□ -0.01
CD74P04233 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.97□□□□□ -0.01
CD74P04233 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CD74P04233 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.96□□□□□ -0.01
CD74P04233 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CD74P04233 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.96□□□□□ -0.01
CD74P04233 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.96□□□□□ -0.01
CD74P04233 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.96□□□□□ -0.01
CD74P04233 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.96□□□□□ -0.01
CD74P04233 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CD74P04233 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CD74P04233 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.96□□□□□ -0.01
CD74P04233 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CD74P04233 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.96□□□□□ -0.01
CD74P04233 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.96□□□□□ -0.01
CD74P04233 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.96□□□□□ -0.01
CD74P04233 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CD74P04233 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.96□□□□□ -0.01
CD74P04233 WWOX-216ENST00000569818 525 ntBASIC14.96□□□□□ -0.01
CD74P04233 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD74P04233 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.96□□□□□ -0.01
CD74P04233 DGCR10-201ENST00000609839 495 ntBASIC14.96□□□□□ -0.01
CD74P04233 AL109923.1-201ENST00000618799 583 ntBASIC14.96□□□□□ -0.01
CD74P04233 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CD74P04233 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CD74P04233 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CD74P04233 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CD74P04233 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.96□□□□□ -0.02
CD74P04233 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CD74P04233 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.95□□□□□ -0.02
CD74P04233 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.95□□□□□ -0.02
CD74P04233 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.95□□□□□ -0.02
CD74P04233 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.95□□□□□ -0.02
CD74P04233 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.95□□□□□ -0.02
CD74P04233 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CD74P04233 ID1-201ENST00000376105 1233 ntBASIC14.95□□□□□ -0.02
CD74P04233 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CD74P04233 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.95□□□□□ -0.02
CD74P04233 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 RN7SL471P-201ENST00000580476 299 ntBASIC14.95□□□□□ -0.02
CD74P04233 AF186192.3-201ENST00000583427 947 ntBASIC14.95□□□□□ -0.02
CD74P04233 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CD74P04233 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.95□□□□□ -0.02
CD74P04233 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.95□□□□□ -0.02
CD74P04233 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CD74P04233 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD74P04233 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms