Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PDGFBP01127 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.77■□□□□ 0.44
PDGFBP01127 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFBP01127 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.77■□□□□ 0.44
PDGFBP01127 AC022494.1-201ENST00000466044 728 ntBASIC17.77■□□□□ 0.44
PDGFBP01127 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFBP01127 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFBP01127 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFBP01127 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.77■□□□□ 0.44
PDGFBP01127 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.77■□□□□ 0.44
PDGFBP01127 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.77■□□□□ 0.44
PDGFBP01127 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFBP01127 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PDGFBP01127 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFBP01127 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.77■□□□□ 0.43
PDGFBP01127 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFBP01127 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFBP01127 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.77■□□□□ 0.43
PDGFBP01127 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFBP01127 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFBP01127 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 TUBB3P1-201ENST00000405796 1332 ntBASIC17.76■□□□□ 0.43
PDGFBP01127 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.76■□□□□ 0.43
PDGFBP01127 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
PDGFBP01127 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.76■□□□□ 0.43
PDGFBP01127 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDGFBP01127 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.76■□□□□ 0.43
PDGFBP01127 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.76■□□□□ 0.43
PDGFBP01127 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.76■□□□□ 0.43
PDGFBP01127 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.76■□□□□ 0.43
PDGFBP01127 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PDGFBP01127 AL359881.2-201ENST00000602973 570 ntBASIC17.76■□□□□ 0.43
PDGFBP01127 SLC25A24-204ENST00000569674 2357 ntBASIC17.76■□□□□ 0.43
PDGFBP01127 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.76■□□□□ 0.43
PDGFBP01127 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.76■□□□□ 0.43
PDGFBP01127 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PDGFBP01127 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDGFBP01127 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFBP01127 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PDGFBP01127 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFBP01127 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFBP01127 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.75■□□□□ 0.43
PDGFBP01127 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.75■□□□□ 0.43
PDGFBP01127 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.75■□□□□ 0.43
PDGFBP01127 AC112191.1-201ENST00000523689 701 ntBASIC17.75■□□□□ 0.43
PDGFBP01127 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 SLC25A39P2-201ENST00000537614 270 ntBASIC17.75■□□□□ 0.43
PDGFBP01127 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
PDGFBP01127 AC026120.1-201ENST00000611536 926 ntBASIC17.75■□□□□ 0.43
PDGFBP01127 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.75■□□□□ 0.43
PDGFBP01127 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.75■□□□□ 0.43
PDGFBP01127 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PDGFBP01127 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFBP01127 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDGFBP01127 FO538757.1-201ENST00000623083 1397 ntBASIC17.75■□□□□ 0.43
PDGFBP01127 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 AC097637.2-201ENST00000624096 1997 ntBASIC17.75■□□□□ 0.43
PDGFBP01127 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PDGFBP01127 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.75■□□□□ 0.43
PDGFBP01127 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFBP01127 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDGFBP01127 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFBP01127 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDGFBP01127 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PDGFBP01127 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFBP01127 FAM58DP-201ENST00000428076 619 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms