Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN2BO60939 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCN2BO60939 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.9■□□□□ 0.3
SCN2BO60939 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.9■□□□□ 0.3
SCN2BO60939 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN2BO60939 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCN2BO60939 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCN2BO60939 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.89■□□□□ 0.3
SCN2BO60939 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCN2BO60939 AC009053.2-201ENST00000563701 2365 ntBASIC16.89■□□□□ 0.3
SCN2BO60939 PCDHA12-202ENST00000613593 2588 ntBASIC16.89■□□□□ 0.3
SCN2BO60939 CROCCP2-202ENST00000412962 2773 ntBASIC16.89■□□□□ 0.3
SCN2BO60939 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
SCN2BO60939 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SCN2BO60939 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN2BO60939 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN2BO60939 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.89■□□□□ 0.29
SCN2BO60939 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN2BO60939 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.89■□□□□ 0.29
SCN2BO60939 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN2BO60939 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.89■□□□□ 0.29
SCN2BO60939 AL023973.1-201ENST00000624619 620 ntBASIC16.89■□□□□ 0.29
SCN2BO60939 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SCN2BO60939 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN2BO60939 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.89■□□□□ 0.29
SCN2BO60939 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SCN2BO60939 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN2BO60939 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN2BO60939 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN2BO60939 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.89■□□□□ 0.29
SCN2BO60939 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SCN2BO60939 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN2BO60939 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.88■□□□□ 0.29
SCN2BO60939 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.88■□□□□ 0.29
SCN2BO60939 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SCN2BO60939 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.88■□□□□ 0.29
SCN2BO60939 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
SCN2BO60939 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.88■□□□□ 0.29
SCN2BO60939 SLC25A3P1-201ENST00000443844 931 ntBASIC16.88■□□□□ 0.29
SCN2BO60939 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.88■□□□□ 0.29
SCN2BO60939 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 AC034232.1-201ENST00000506026 1064 ntBASIC16.88■□□□□ 0.29
SCN2BO60939 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.88■□□□□ 0.29
SCN2BO60939 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SCN2BO60939 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.88■□□□□ 0.29
SCN2BO60939 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SCN2BO60939 AC010203.1-204ENST00000548782 407 ntBASIC16.88■□□□□ 0.29
SCN2BO60939 AL441883.1-201ENST00000566170 1045 ntBASIC16.88■□□□□ 0.29
SCN2BO60939 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.88■□□□□ 0.29
SCN2BO60939 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.88■□□□□ 0.29
SCN2BO60939 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.88■□□□□ 0.29
SCN2BO60939 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.88■□□□□ 0.29
SCN2BO60939 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.88■□□□□ 0.29
SCN2BO60939 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.88■□□□□ 0.29
SCN2BO60939 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
SCN2BO60939 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCN2BO60939 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SCN2BO60939 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCN2BO60939 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN2BO60939 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN2BO60939 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.87■□□□□ 0.29
SCN2BO60939 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN2BO60939 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN2BO60939 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCN2BO60939 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCN2BO60939 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
SCN2BO60939 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCN2BO60939 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SCN2BO60939 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCN2BO60939 HLA-F-220ENST00000434407 884 ntBASIC16.87■□□□□ 0.29
SCN2BO60939 DDX43P3-201ENST00000441064 443 ntBASIC16.87■□□□□ 0.29
SCN2BO60939 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SCN2BO60939 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.87■□□□□ 0.29
SCN2BO60939 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SCN2BO60939 LINC01451-201ENST00000623792 534 ntBASIC16.87■□□□□ 0.29
SCN2BO60939 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SCN2BO60939 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms