Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.38■□□□□ 0.37
PEX1O43933 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.38■□□□□ 0.37
PEX1O43933 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PEX1O43933 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.38■□□□□ 0.37
PEX1O43933 AC117947.1-201ENST00000427448 529 ntBASIC17.38■□□□□ 0.37
PEX1O43933 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PEX1O43933 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PEX1O43933 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PEX1O43933 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 AL391005.1-201ENST00000623953 2435 ntBASIC17.38■□□□□ 0.37
PEX1O43933 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PEX1O43933 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PEX1O43933 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.37■□□□□ 0.37
PEX1O43933 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
PEX1O43933 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PEX1O43933 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.37■□□□□ 0.37
PEX1O43933 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.37■□□□□ 0.37
PEX1O43933 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.37■□□□□ 0.37
PEX1O43933 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.37■□□□□ 0.37
PEX1O43933 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PEX1O43933 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.37■□□□□ 0.37
PEX1O43933 TSPY23P-201ENST00000440136 739 ntBASIC17.37■□□□□ 0.37
PEX1O43933 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.37■□□□□ 0.37
PEX1O43933 COX11P1-201ENST00000489116 835 ntBASIC17.37■□□□□ 0.37
PEX1O43933 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.37■□□□□ 0.37
PEX1O43933 WWOX-216ENST00000569818 525 ntBASIC17.37■□□□□ 0.37
PEX1O43933 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
PEX1O43933 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.37■□□□□ 0.37
PEX1O43933 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PEX1O43933 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.37■□□□□ 0.37
PEX1O43933 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.37■□□□□ 0.37
PEX1O43933 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.37■□□□□ 0.37
PEX1O43933 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PEX1O43933 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PEX1O43933 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.36■□□□□ 0.37
PEX1O43933 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PEX1O43933 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PEX1O43933 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEX1O43933 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PEX1O43933 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.36■□□□□ 0.37
PEX1O43933 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEX1O43933 AL162727.3-201ENST00000635661 2787 ntBASIC17.36■□□□□ 0.37
PEX1O43933 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.36■□□□□ 0.37
PEX1O43933 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PEX1O43933 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEX1O43933 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PEX1O43933 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PEX1O43933 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PEX1O43933 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEX1O43933 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEX1O43933 RNF152P1-201ENST00000397754 604 ntBASIC17.36■□□□□ 0.37
PEX1O43933 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
PEX1O43933 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.36■□□□□ 0.37
PEX1O43933 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.36■□□□□ 0.37
PEX1O43933 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.36■□□□□ 0.37
PEX1O43933 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.36■□□□□ 0.37
PEX1O43933 LINC01238-205ENST00000567549 1107 ntBASIC17.36■□□□□ 0.37
PEX1O43933 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.36■□□□□ 0.37
PEX1O43933 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.36■□□□□ 0.37
PEX1O43933 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEX1O43933 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms