Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PROM1O43490 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PROM1O43490 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PROM1O43490 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.91■□□□□ 0.3
PROM1O43490 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 KRT8P47-201ENST00000604727 1398 ntBASIC16.91■□□□□ 0.3
PROM1O43490 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PROM1O43490 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.91■□□□□ 0.3
PROM1O43490 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PROM1O43490 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.91■□□□□ 0.3
PROM1O43490 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.91■□□□□ 0.3
PROM1O43490 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.91■□□□□ 0.3
PROM1O43490 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.91■□□□□ 0.3
PROM1O43490 AC090616.6-201ENST00000582640 721 ntBASIC16.91■□□□□ 0.3
PROM1O43490 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.91■□□□□ 0.3
PROM1O43490 AC091076.1-201ENST00000610741 619 ntBASIC16.91■□□□□ 0.3
PROM1O43490 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PROM1O43490 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.91■□□□□ 0.3
PROM1O43490 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.91■□□□□ 0.3
PROM1O43490 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PROM1O43490 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 IER3-202ENST00000376377 1350 ntBASIC16.9■□□□□ 0.3
PROM1O43490 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.9■□□□□ 0.3
PROM1O43490 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PROM1O43490 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 BX276092.5-203ENST00000456199 560 ntBASIC16.9■□□□□ 0.3
PROM1O43490 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 AL121672.3-201ENST00000608644 468 ntBASIC16.9■□□□□ 0.3
PROM1O43490 AC116407.2-201ENST00000613639 860 ntBASIC16.9■□□□□ 0.3
PROM1O43490 AL358472.4-201ENST00000633140 710 ntBASIC16.9■□□□□ 0.3
PROM1O43490 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PROM1O43490 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PROM1O43490 GNAS-203ENST00000306120 1878 ntBASIC16.9■□□□□ 0.3
PROM1O43490 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PROM1O43490 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PROM1O43490 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.9■□□□□ 0.3
PROM1O43490 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.9■□□□□ 0.3
PROM1O43490 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PROM1O43490 AC016734.2-201ENST00000624325 1377 ntBASIC16.89■□□□□ 0.3
PROM1O43490 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PROM1O43490 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
PROM1O43490 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.89■□□□□ 0.29
PROM1O43490 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
PROM1O43490 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.89■□□□□ 0.29
PROM1O43490 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.89■□□□□ 0.29
PROM1O43490 IGHV3-41-201ENST00000613121 348 ntBASIC16.89■□□□□ 0.29
PROM1O43490 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.89■□□□□ 0.29
PROM1O43490 AC124864.1-201ENST00000623408 392 ntBASIC16.89■□□□□ 0.29
PROM1O43490 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PROM1O43490 AP000550.4-202ENST00000639755 178 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms