Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN4O00479 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HMGN4O00479 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.56■□□□□ 0.24
HMGN4O00479 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN4O00479 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN4O00479 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN4O00479 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN4O00479 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN4O00479 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN4O00479 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN4O00479 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGN4O00479 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HMGN4O00479 AP001094.4-201ENST00000579008 2176 ntBASIC16.55■□□□□ 0.24
HMGN4O00479 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN4O00479 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGN4O00479 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 AC068472.1-201ENST00000474589 881 ntBASIC16.55■□□□□ 0.24
HMGN4O00479 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN4O00479 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.55■□□□□ 0.24
HMGN4O00479 VENTXP5-201ENST00000523979 775 ntBASIC16.55■□□□□ 0.24
HMGN4O00479 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGN4O00479 LINC01023-201ENST00000606054 436 ntBASIC16.55■□□□□ 0.24
HMGN4O00479 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.55■□□□□ 0.24
HMGN4O00479 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HMGN4O00479 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HMGN4O00479 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGN4O00479 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN4O00479 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGN4O00479 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGN4O00479 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGN4O00479 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HMGN4O00479 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 PRORSD1P-202ENST00000563365 2154 ntBASIC16.54■□□□□ 0.24
HMGN4O00479 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGN4O00479 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HMGN4O00479 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGN4O00479 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HMGN4O00479 MTCL1P1-201ENST00000446207 792 ntBASIC16.54■□□□□ 0.24
HMGN4O00479 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGN4O00479 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.54■□□□□ 0.24
HMGN4O00479 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGN4O00479 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.54■□□□□ 0.24
HMGN4O00479 AC005332.3-201ENST00000589904 676 ntBASIC16.54■□□□□ 0.24
HMGN4O00479 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HMGN4O00479 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGN4O00479 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HMGN4O00479 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HMGN4O00479 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGN4O00479 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGN4O00479 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGN4O00479 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGN4O00479 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGN4O00479 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN4O00479 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN4O00479 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN4O00479 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
HMGN4O00479 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
HMGN4O00479 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HMGN4O00479 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms