Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL1A6NKG5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL1A6NKG5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 IGLL3P-201ENST00000412472 434 ntBASIC23.47■■□□□ 1.35
RTL1A6NKG5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 AL353135.1-201ENST00000606729 504 ntBASIC23.47■■□□□ 1.35
RTL1A6NKG5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL1A6NKG5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
RTL1A6NKG5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
RTL1A6NKG5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL1A6NKG5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTL1A6NKG5 AL020996.1-203ENST00000536896 2307 ntBASIC23.46■■□□□ 1.35
RTL1A6NKG5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL1A6NKG5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL1A6NKG5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTL1A6NKG5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.46■■□□□ 1.35
RTL1A6NKG5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTL1A6NKG5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.46■■□□□ 1.35
RTL1A6NKG5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC23.46■■□□□ 1.35
RTL1A6NKG5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC23.46■■□□□ 1.35
RTL1A6NKG5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.46■■□□□ 1.35
RTL1A6NKG5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.46■■□□□ 1.35
RTL1A6NKG5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC23.46■■□□□ 1.35
RTL1A6NKG5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTL1A6NKG5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL1A6NKG5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL1A6NKG5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
RTL1A6NKG5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.35
RTL1A6NKG5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
RTL1A6NKG5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RTL1A6NKG5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTL1A6NKG5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTL1A6NKG5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTL1A6NKG5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTL1A6NKG5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTL1A6NKG5 CRYGEP-201ENST00000412192 528 ntBASIC23.45■■□□□ 1.34
RTL1A6NKG5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 VN2R19P-201ENST00000442399 1052 ntBASIC23.45■■□□□ 1.34
RTL1A6NKG5 IGHV3-52-201ENST00000519770 353 ntBASIC23.45■■□□□ 1.34
RTL1A6NKG5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTL1A6NKG5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTL1A6NKG5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTL1A6NKG5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL1A6NKG5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTL1A6NKG5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
RTL1A6NKG5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.44■■□□□ 1.34
RTL1A6NKG5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
RTL1A6NKG5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTL1A6NKG5 MYCLP1-201ENST00000372451 1075 ntBASIC23.44■■□□□ 1.34
RTL1A6NKG5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.44■■□□□ 1.34
RTL1A6NKG5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.44■■□□□ 1.34
RTL1A6NKG5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTL1A6NKG5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
RTL1A6NKG5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.44■■□□□ 1.34
RTL1A6NKG5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTL1A6NKG5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTL1A6NKG5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC23.44■■□□□ 1.34
RTL1A6NKG5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTL1A6NKG5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.44■■□□□ 1.34
RTL1A6NKG5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
RTL1A6NKG5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTL1A6NKG5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL1A6NKG5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC23.43■■□□□ 1.34
RTL1A6NKG5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
RTL1A6NKG5 AP002414.1-201ENST00000391405 1147 ntBASIC23.43■■□□□ 1.34
RTL1A6NKG5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.43■■□□□ 1.34
RTL1A6NKG5 PMS2P2-201ENST00000425039 1128 ntBASIC23.43■■□□□ 1.34
RTL1A6NKG5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.43■■□□□ 1.34
RTL1A6NKG5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.43■■□□□ 1.34
RTL1A6NKG5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTL1A6NKG5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC23.43■■□□□ 1.34
RTL1A6NKG5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL1A6NKG5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.43■■□□□ 1.34
RTL1A6NKG5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL1A6NKG5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.43■■□□□ 1.34
RTL1A6NKG5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTL1A6NKG5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.43■■□□□ 1.34
RTL1A6NKG5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL1A6NKG5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL1A6NKG5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL1A6NKG5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms