Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 BX005266.1-201ENST00000473402 457 ntBASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 PMPCAP1-201ENST00000508114 1576 ntBASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 COX5BP2-201ENST00000392354 334 ntBASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 TERC-201ENST00000602385 541 ntBASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 GPALPP1-207ENST00000611650 899 ntBASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 AC079776.2-201ENST00000641154 1609 ntBASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3FA6NER0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 SIRPAP1-201ENST00000448467 1770 ntBASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 POLD2P1-201ENST00000511220 997 ntBASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 AC012640.2-201ENST00000561606 901 ntBASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 AD001527.2-201ENST00000622994 785 ntBASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 AC008735.5-201ENST00000623544 497 ntBASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.67■□□□□ 0.42
TBC1D3FA6NER0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms