Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.28■□□□□ 0.84
SYCE3A1L190 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.27■□□□□ 0.84
SYCE3A1L190 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYCE3A1L190 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.27■□□□□ 0.84
SYCE3A1L190 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SYCE3A1L190 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.27■□□□□ 0.84
SYCE3A1L190 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SYCE3A1L190 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
SYCE3A1L190 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYCE3A1L190 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYCE3A1L190 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYCE3A1L190 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYCE3A1L190 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYCE3A1L190 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYCE3A1L190 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.27■□□□□ 0.84
SYCE3A1L190 RN7SL471P-201ENST00000580476 299 ntBASIC20.27■□□□□ 0.84
SYCE3A1L190 AF186192.3-201ENST00000583427 947 ntBASIC20.27■□□□□ 0.84
SYCE3A1L190 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYCE3A1L190 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYCE3A1L190 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SYCE3A1L190 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYCE3A1L190 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.27■□□□□ 0.84
SYCE3A1L190 AC005915.1-201ENST00000624912 2018 ntBASIC20.27■□□□□ 0.84
SYCE3A1L190 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SYCE3A1L190 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SYCE3A1L190 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
SYCE3A1L190 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.27■□□□□ 0.83
SYCE3A1L190 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.27■□□□□ 0.83
SYCE3A1L190 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SYCE3A1L190 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SYCE3A1L190 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SYCE3A1L190 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
SYCE3A1L190 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.26■□□□□ 0.83
SYCE3A1L190 FSCN1P1-201ENST00000568912 1481 ntBASIC20.26■□□□□ 0.83
SYCE3A1L190 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.26■□□□□ 0.83
SYCE3A1L190 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.26■□□□□ 0.83
SYCE3A1L190 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.26■□□□□ 0.83
SYCE3A1L190 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.26■□□□□ 0.83
SYCE3A1L190 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SYCE3A1L190 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SYCE3A1L190 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
SYCE3A1L190 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYCE3A1L190 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.25■□□□□ 0.83
SYCE3A1L190 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.25■□□□□ 0.83
SYCE3A1L190 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SYCE3A1L190 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.25■□□□□ 0.83
SYCE3A1L190 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 AC073195.1-201ENST00000607241 877 ntBASIC20.25■□□□□ 0.83
SYCE3A1L190 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 LINC01451-201ENST00000623792 534 ntBASIC20.25■□□□□ 0.83
SYCE3A1L190 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SYCE3A1L190 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 KRT8P7-201ENST00000533003 1432 ntBASIC20.25■□□□□ 0.83
SYCE3A1L190 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SYCE3A1L190 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.25■□□□□ 0.83
SYCE3A1L190 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYCE3A1L190 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.24■□□□□ 0.83
SYCE3A1L190 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms