Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF11Q9Y3C5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF11Q9Y3C5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.86■■□□□ 1.41
RNF11Q9Y3C5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF11Q9Y3C5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.86■■□□□ 1.41
RNF11Q9Y3C5 CR559946.2-201ENST00000623684 991 ntBASIC23.86■■□□□ 1.41
RNF11Q9Y3C5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RNF11Q9Y3C5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF11Q9Y3C5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF11Q9Y3C5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF11Q9Y3C5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF11Q9Y3C5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.85■■□□□ 1.41
RNF11Q9Y3C5 AC148477.6-201ENST00000623746 465 ntBASIC23.85■■□□□ 1.41
RNF11Q9Y3C5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.85■■□□□ 1.41
RNF11Q9Y3C5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF11Q9Y3C5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF11Q9Y3C5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF11Q9Y3C5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF11Q9Y3C5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF11Q9Y3C5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF11Q9Y3C5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RNF11Q9Y3C5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF11Q9Y3C5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RNF11Q9Y3C5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF11Q9Y3C5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.83■■□□□ 1.41
RNF11Q9Y3C5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RNF11Q9Y3C5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF11Q9Y3C5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF11Q9Y3C5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RNF11Q9Y3C5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.83■■□□□ 1.4
RNF11Q9Y3C5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
RNF11Q9Y3C5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RNF11Q9Y3C5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF11Q9Y3C5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF11Q9Y3C5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RNF11Q9Y3C5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RNF11Q9Y3C5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RNF11Q9Y3C5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
RNF11Q9Y3C5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
RNF11Q9Y3C5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF11Q9Y3C5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.8■■□□□ 1.4
RNF11Q9Y3C5 MIR3648-2-201ENST00000581792 180 ntBASIC23.8■■□□□ 1.4
RNF11Q9Y3C5 MIR3648-1-201ENST00000615959 180 ntBASIC23.8■■□□□ 1.4
RNF11Q9Y3C5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.8■■□□□ 1.4
RNF11Q9Y3C5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF11Q9Y3C5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF11Q9Y3C5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF11Q9Y3C5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF11Q9Y3C5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF11Q9Y3C5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
RNF11Q9Y3C5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF11Q9Y3C5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RNF11Q9Y3C5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF11Q9Y3C5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF11Q9Y3C5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF11Q9Y3C5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF11Q9Y3C5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.78■■□□□ 1.4
RNF11Q9Y3C5 AC145676.1-201ENST00000514988 2004 ntBASIC23.77■■□□□ 1.4
RNF11Q9Y3C5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF11Q9Y3C5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF11Q9Y3C5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF11Q9Y3C5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF11Q9Y3C5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF11Q9Y3C5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF11Q9Y3C5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF11Q9Y3C5 AC092803.2-201ENST00000564287 1899 ntBASIC23.77■■□□□ 1.4
RNF11Q9Y3C5 AC020928.2-201ENST00000588717 2197 ntBASIC23.76■■□□□ 1.39
RNF11Q9Y3C5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RNF11Q9Y3C5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF11Q9Y3C5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
RNF11Q9Y3C5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF11Q9Y3C5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF11Q9Y3C5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RNF11Q9Y3C5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF11Q9Y3C5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF11Q9Y3C5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RNF11Q9Y3C5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF11Q9Y3C5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.74■■□□□ 1.39
RNF11Q9Y3C5 AC016575.1-201ENST00000607026 382 ntBASIC23.74■■□□□ 1.39
RNF11Q9Y3C5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF11Q9Y3C5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF11Q9Y3C5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF11Q9Y3C5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF11Q9Y3C5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF11Q9Y3C5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF11Q9Y3C5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF11Q9Y3C5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF11Q9Y3C5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
RNF11Q9Y3C5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF11Q9Y3C5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.72■■□□□ 1.39
RNF11Q9Y3C5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF11Q9Y3C5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF11Q9Y3C5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF11Q9Y3C5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF11Q9Y3C5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF11Q9Y3C5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF11Q9Y3C5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RNF11Q9Y3C5 AL359258.2-201ENST00000564063 1566 ntBASIC23.71■■□□□ 1.39
RNF11Q9Y3C5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF11Q9Y3C5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms