Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.02■□□□□ 0.32
UBE2D4Q9Y2X8 AC010501.1-201ENST00000606270 1962 ntBASIC17.02■□□□□ 0.31
UBE2D4Q9Y2X8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.02■□□□□ 0.31
UBE2D4Q9Y2X8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
UBE2D4Q9Y2X8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.01■□□□□ 0.31
UBE2D4Q9Y2X8 MIR3665-201ENST00000578708 105 ntBASIC17.01■□□□□ 0.31
UBE2D4Q9Y2X8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2D4Q9Y2X8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2D4Q9Y2X8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
UBE2D4Q9Y2X8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2D4Q9Y2X8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17■□□□□ 0.31
UBE2D4Q9Y2X8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2D4Q9Y2X8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2D4Q9Y2X8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2D4Q9Y2X8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.99■□□□□ 0.31
UBE2D4Q9Y2X8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.99■□□□□ 0.31
UBE2D4Q9Y2X8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2D4Q9Y2X8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
UBE2D4Q9Y2X8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
UBE2D4Q9Y2X8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
UBE2D4Q9Y2X8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBE2D4Q9Y2X8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBE2D4Q9Y2X8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBE2D4Q9Y2X8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBE2D4Q9Y2X8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D4Q9Y2X8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D4Q9Y2X8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D4Q9Y2X8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D4Q9Y2X8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2D4Q9Y2X8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.96■□□□□ 0.31
UBE2D4Q9Y2X8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UBE2D4Q9Y2X8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2D4Q9Y2X8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2D4Q9Y2X8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 AC142381.3-201ENST00000568208 1670 ntBASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2D4Q9Y2X8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
UBE2D4Q9Y2X8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2D4Q9Y2X8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2D4Q9Y2X8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2D4Q9Y2X8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.93■□□□□ 0.3
UBE2D4Q9Y2X8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2D4Q9Y2X8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2D4Q9Y2X8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
UBE2D4Q9Y2X8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2D4Q9Y2X8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2D4Q9Y2X8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.93■□□□□ 0.3
UBE2D4Q9Y2X8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D4Q9Y2X8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D4Q9Y2X8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D4Q9Y2X8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D4Q9Y2X8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2D4Q9Y2X8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2D4Q9Y2X8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D4Q9Y2X8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D4Q9Y2X8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D4Q9Y2X8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
UBE2D4Q9Y2X8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D4Q9Y2X8 AP006261.1-201ENST00000584783 668 ntBASIC16.9■□□□□ 0.3
UBE2D4Q9Y2X8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D4Q9Y2X8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
UBE2D4Q9Y2X8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2D4Q9Y2X8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2D4Q9Y2X8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2D4Q9Y2X8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2D4Q9Y2X8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2D4Q9Y2X8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.89■□□□□ 0.29
UBE2D4Q9Y2X8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.89■□□□□ 0.29
UBE2D4Q9Y2X8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2D4Q9Y2X8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2D4Q9Y2X8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.88■□□□□ 0.29
UBE2D4Q9Y2X8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2D4Q9Y2X8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.88■□□□□ 0.29
UBE2D4Q9Y2X8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.88■□□□□ 0.29
UBE2D4Q9Y2X8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.88■□□□□ 0.29
UBE2D4Q9Y2X8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2D4Q9Y2X8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.88■□□□□ 0.29
UBE2D4Q9Y2X8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBE2D4Q9Y2X8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2D4Q9Y2X8 AC022211.4-201ENST00000625094 2161 ntBASIC16.87■□□□□ 0.29
UBE2D4Q9Y2X8 AC087741.3-201ENST00000624270 1347 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms