Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.35■■□□□ 1.17
KRCC1Q9NPI7 AC020928.2-201ENST00000588717 2197 ntBASIC22.35■■□□□ 1.17
KRCC1Q9NPI7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KRCC1Q9NPI7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KRCC1Q9NPI7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
KRCC1Q9NPI7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
KRCC1Q9NPI7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.34■■□□□ 1.17
KRCC1Q9NPI7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KRCC1Q9NPI7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KRCC1Q9NPI7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.34■■□□□ 1.17
KRCC1Q9NPI7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
KRCC1Q9NPI7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KRCC1Q9NPI7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
KRCC1Q9NPI7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
KRCC1Q9NPI7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
KRCC1Q9NPI7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KRCC1Q9NPI7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.33■■□□□ 1.17
KRCC1Q9NPI7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
KRCC1Q9NPI7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
KRCC1Q9NPI7 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.33■■□□□ 1.17
KRCC1Q9NPI7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KRCC1Q9NPI7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
KRCC1Q9NPI7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KRCC1Q9NPI7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KRCC1Q9NPI7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
KRCC1Q9NPI7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KRCC1Q9NPI7 LINC01971-201ENST00000617888 1048 ntBASIC22.32■■□□□ 1.16
KRCC1Q9NPI7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KRCC1Q9NPI7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KRCC1Q9NPI7 AC008813.1-201ENST00000536597 885 ntBASIC22.31■■□□□ 1.16
KRCC1Q9NPI7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.31■■□□□ 1.16
KRCC1Q9NPI7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.31■■□□□ 1.16
KRCC1Q9NPI7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KRCC1Q9NPI7 AC135731.1-201ENST00000569415 2548 ntBASIC22.3■■□□□ 1.16
KRCC1Q9NPI7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KRCC1Q9NPI7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KRCC1Q9NPI7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KRCC1Q9NPI7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
KRCC1Q9NPI7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
KRCC1Q9NPI7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KRCC1Q9NPI7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
KRCC1Q9NPI7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.29■■□□□ 1.16
KRCC1Q9NPI7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KRCC1Q9NPI7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.29■■□□□ 1.16
KRCC1Q9NPI7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.29■■□□□ 1.16
KRCC1Q9NPI7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KRCC1Q9NPI7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KRCC1Q9NPI7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KRCC1Q9NPI7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRCC1Q9NPI7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRCC1Q9NPI7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
KRCC1Q9NPI7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KRCC1Q9NPI7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
KRCC1Q9NPI7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.28■■□□□ 1.16
KRCC1Q9NPI7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KRCC1Q9NPI7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRCC1Q9NPI7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRCC1Q9NPI7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KRCC1Q9NPI7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRCC1Q9NPI7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KRCC1Q9NPI7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.27■■□□□ 1.16
KRCC1Q9NPI7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KRCC1Q9NPI7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.27■■□□□ 1.16
KRCC1Q9NPI7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
KRCC1Q9NPI7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KRCC1Q9NPI7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.26■■□□□ 1.15
KRCC1Q9NPI7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.26■■□□□ 1.15
KRCC1Q9NPI7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
KRCC1Q9NPI7 AC010501.1-201ENST00000606270 1962 ntBASIC22.26■■□□□ 1.15
KRCC1Q9NPI7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KRCC1Q9NPI7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.26■■□□□ 1.15
KRCC1Q9NPI7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
KRCC1Q9NPI7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KRCC1Q9NPI7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.25■■□□□ 1.15
KRCC1Q9NPI7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.25■■□□□ 1.15
KRCC1Q9NPI7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.25■■□□□ 1.15
KRCC1Q9NPI7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
KRCC1Q9NPI7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
KRCC1Q9NPI7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.25■■□□□ 1.15
KRCC1Q9NPI7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.25■■□□□ 1.15
KRCC1Q9NPI7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
KRCC1Q9NPI7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KRCC1Q9NPI7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
KRCC1Q9NPI7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.24■■□□□ 1.15
KRCC1Q9NPI7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KRCC1Q9NPI7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KRCC1Q9NPI7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 DUX4L13-201ENST00000554103 1267 ntBASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 DUX4L15-201ENST00000611059 1267 ntBASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 DUX4L23-201ENST00000615195 1269 ntBASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 DUX4L24-201ENST00000617576 1269 ntBASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 DUX4L22-201ENST00000618238 1269 ntBASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 DUX4L20-201ENST00000619712 1269 ntBASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 DUX4L21-201ENST00000622058 1269 ntBASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 DUX4L10-201ENST00000622460 1267 ntBASIC22.23■■□□□ 1.15
KRCC1Q9NPI7 DUX4L25-201ENST00000624915 1269 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms