Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.76■■■□□ 2.19
EFCC1Q9HA90 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
EFCC1Q9HA90 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
EFCC1Q9HA90 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.75■■■□□ 2.19
EFCC1Q9HA90 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
EFCC1Q9HA90 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.75■■■□□ 2.19
EFCC1Q9HA90 AC018755.3-202ENST00000596210 929 ntBASIC28.75■■■□□ 2.19
EFCC1Q9HA90 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.75■■■□□ 2.19
EFCC1Q9HA90 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.75■■■□□ 2.19
EFCC1Q9HA90 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.74■■■□□ 2.19
EFCC1Q9HA90 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
EFCC1Q9HA90 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
EFCC1Q9HA90 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
EFCC1Q9HA90 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
EFCC1Q9HA90 AL031848.2-201ENST00000607670 837 ntBASIC28.73■■■□□ 2.19
EFCC1Q9HA90 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
EFCC1Q9HA90 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
EFCC1Q9HA90 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.72■■■□□ 2.19
EFCC1Q9HA90 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.72■■■□□ 2.19
EFCC1Q9HA90 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
EFCC1Q9HA90 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
EFCC1Q9HA90 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.72■■■□□ 2.19
EFCC1Q9HA90 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
EFCC1Q9HA90 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.71■■■□□ 2.19
EFCC1Q9HA90 AC103724.3-201ENST00000564481 992 ntBASIC28.71■■■□□ 2.19
EFCC1Q9HA90 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
EFCC1Q9HA90 AC008406.3-201ENST00000620001 1374 ntBASIC28.7■■■□□ 2.18
EFCC1Q9HA90 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
EFCC1Q9HA90 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
EFCC1Q9HA90 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.69■■■□□ 2.18
EFCC1Q9HA90 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
EFCC1Q9HA90 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
EFCC1Q9HA90 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
EFCC1Q9HA90 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.68■■■□□ 2.18
EFCC1Q9HA90 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.68■■■□□ 2.18
EFCC1Q9HA90 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.68■■■□□ 2.18
EFCC1Q9HA90 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.68■■■□□ 2.18
EFCC1Q9HA90 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.68■■■□□ 2.18
EFCC1Q9HA90 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.67■■■□□ 2.18
EFCC1Q9HA90 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.66■■■□□ 2.18
EFCC1Q9HA90 MIR3960-201ENST00000583311 91 ntBASIC28.65■■■□□ 2.18
EFCC1Q9HA90 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
EFCC1Q9HA90 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
EFCC1Q9HA90 ABCB10P3-201ENST00000561950 2166 ntBASIC28.63■■■□□ 2.17
EFCC1Q9HA90 AC239859.2-201ENST00000444165 318 ntBASIC28.63■■■□□ 2.17
EFCC1Q9HA90 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.63■■■□□ 2.17
EFCC1Q9HA90 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.63■■■□□ 2.17
EFCC1Q9HA90 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
EFCC1Q9HA90 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
EFCC1Q9HA90 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
EFCC1Q9HA90 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
EFCC1Q9HA90 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
EFCC1Q9HA90 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.62■■■□□ 2.17
EFCC1Q9HA90 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
EFCC1Q9HA90 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
EFCC1Q9HA90 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
EFCC1Q9HA90 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.61■■■□□ 2.17
EFCC1Q9HA90 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
EFCC1Q9HA90 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
EFCC1Q9HA90 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
EFCC1Q9HA90 AL139393.2-201ENST00000608721 2025 ntBASIC28.6■■■□□ 2.17
EFCC1Q9HA90 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
EFCC1Q9HA90 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
EFCC1Q9HA90 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.6■■■□□ 2.17
EFCC1Q9HA90 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
EFCC1Q9HA90 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
EFCC1Q9HA90 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
EFCC1Q9HA90 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.59■■■□□ 2.17
EFCC1Q9HA90 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
EFCC1Q9HA90 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
EFCC1Q9HA90 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.58■■■□□ 2.17
EFCC1Q9HA90 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
EFCC1Q9HA90 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.57■■■□□ 2.16
EFCC1Q9HA90 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.57■■■□□ 2.16
EFCC1Q9HA90 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
EFCC1Q9HA90 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
EFCC1Q9HA90 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
EFCC1Q9HA90 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.55■■■□□ 2.16
EFCC1Q9HA90 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.55■■■□□ 2.16
EFCC1Q9HA90 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
EFCC1Q9HA90 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.55■■■□□ 2.16
EFCC1Q9HA90 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.55■■■□□ 2.16
EFCC1Q9HA90 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
EFCC1Q9HA90 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
EFCC1Q9HA90 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.55■■■□□ 2.16
EFCC1Q9HA90 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
EFCC1Q9HA90 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
EFCC1Q9HA90 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.53■■■□□ 2.16
EFCC1Q9HA90 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
EFCC1Q9HA90 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms