Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
BRD9Q9H8M2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.56■■□□□ 1.68
BRD9Q9H8M2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
BRD9Q9H8M2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.55■■□□□ 1.68
BRD9Q9H8M2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
BRD9Q9H8M2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
BRD9Q9H8M2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.55■■□□□ 1.68
BRD9Q9H8M2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.55■■□□□ 1.68
BRD9Q9H8M2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
BRD9Q9H8M2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD9Q9H8M2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD9Q9H8M2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BRD9Q9H8M2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.54■■□□□ 1.68
BRD9Q9H8M2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.54■■□□□ 1.68
BRD9Q9H8M2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.54■■□□□ 1.68
BRD9Q9H8M2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.53■■□□□ 1.68
BRD9Q9H8M2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.53■■□□□ 1.68
BRD9Q9H8M2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
BRD9Q9H8M2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
BRD9Q9H8M2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.52■■□□□ 1.68
BRD9Q9H8M2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.52■■□□□ 1.68
BRD9Q9H8M2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.52■■□□□ 1.68
BRD9Q9H8M2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
BRD9Q9H8M2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.51■■□□□ 1.67
BRD9Q9H8M2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
BRD9Q9H8M2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
BRD9Q9H8M2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.51■■□□□ 1.67
BRD9Q9H8M2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
BRD9Q9H8M2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.51■■□□□ 1.67
BRD9Q9H8M2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD9Q9H8M2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD9Q9H8M2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD9Q9H8M2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD9Q9H8M2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
BRD9Q9H8M2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
BRD9Q9H8M2 AC009299.2-201ENST00000482477 511 ntBASIC25.5■■□□□ 1.67
BRD9Q9H8M2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
BRD9Q9H8M2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
BRD9Q9H8M2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD9Q9H8M2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD9Q9H8M2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BRD9Q9H8M2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.49■■□□□ 1.67
BRD9Q9H8M2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BRD9Q9H8M2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.48■■□□□ 1.67
BRD9Q9H8M2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BRD9Q9H8M2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BRD9Q9H8M2 AC103834.1-201ENST00000520383 144 ntBASIC25.48■■□□□ 1.67
BRD9Q9H8M2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BRD9Q9H8M2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
BRD9Q9H8M2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
BRD9Q9H8M2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
BRD9Q9H8M2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
BRD9Q9H8M2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
BRD9Q9H8M2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
BRD9Q9H8M2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
BRD9Q9H8M2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
BRD9Q9H8M2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
BRD9Q9H8M2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
BRD9Q9H8M2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BRD9Q9H8M2 PVT1_1.1-201ENST00000615125 194 ntBASIC25.46■■□□□ 1.67
BRD9Q9H8M2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BRD9Q9H8M2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.67
BRD9Q9H8M2 AL359504.2-201ENST00000605506 1601 ntBASIC25.45■■□□□ 1.66
BRD9Q9H8M2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
BRD9Q9H8M2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
BRD9Q9H8M2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
BRD9Q9H8M2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD9Q9H8M2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD9Q9H8M2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD9Q9H8M2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD9Q9H8M2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.43■■□□□ 1.66
BRD9Q9H8M2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.43■■□□□ 1.66
BRD9Q9H8M2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.43■■□□□ 1.66
BRD9Q9H8M2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.43■■□□□ 1.66
BRD9Q9H8M2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
BRD9Q9H8M2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
BRD9Q9H8M2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
BRD9Q9H8M2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
BRD9Q9H8M2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
BRD9Q9H8M2 MIR4508-201ENST00000584178 70 ntBASIC25.41■■□□□ 1.66
BRD9Q9H8M2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
BRD9Q9H8M2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.4■■□□□ 1.66
BRD9Q9H8M2 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.4■■□□□ 1.66
BRD9Q9H8M2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
BRD9Q9H8M2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
BRD9Q9H8M2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
BRD9Q9H8M2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
BRD9Q9H8M2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.38■■□□□ 1.65
BRD9Q9H8M2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
BRD9Q9H8M2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
BRD9Q9H8M2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
BRD9Q9H8M2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
BRD9Q9H8M2 AL592295.1-201ENST00000400984 884 ntBASIC25.37■■□□□ 1.65
BRD9Q9H8M2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
BRD9Q9H8M2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
BRD9Q9H8M2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
BRD9Q9H8M2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
BRD9Q9H8M2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BRD9Q9H8M2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.36■■□□□ 1.65
BRD9Q9H8M2 AC131212.1-201ENST00000613771 668 ntBASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms