Protein–RNA interactions for Protein: Q9H6D8

FNDC4, Fibronectin type III domain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC4Q9H6D8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FNDC4Q9H6D8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.3■□□□□ 0.68
FNDC4Q9H6D8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FNDC4Q9H6D8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNDC4Q9H6D8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNDC4Q9H6D8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FNDC4Q9H6D8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNDC4Q9H6D8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
FNDC4Q9H6D8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.29■□□□□ 0.68
FNDC4Q9H6D8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FNDC4Q9H6D8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
FNDC4Q9H6D8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FNDC4Q9H6D8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FNDC4Q9H6D8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FNDC4Q9H6D8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 DUX4L13-201ENST00000554103 1267 ntBASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 DUX4L15-201ENST00000611059 1267 ntBASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 DUX4L23-201ENST00000615195 1269 ntBASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 DUX4L24-201ENST00000617576 1269 ntBASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 DUX4L22-201ENST00000618238 1269 ntBASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 DUX4L20-201ENST00000619712 1269 ntBASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 DUX4L21-201ENST00000622058 1269 ntBASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 DUX4L10-201ENST00000622460 1267 ntBASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 DUX4L25-201ENST00000624915 1269 ntBASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
FNDC4Q9H6D8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.27■□□□□ 0.67
FNDC4Q9H6D8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
FNDC4Q9H6D8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.26■□□□□ 0.67
FNDC4Q9H6D8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.26■□□□□ 0.67
FNDC4Q9H6D8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.26■□□□□ 0.67
FNDC4Q9H6D8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FNDC4Q9H6D8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FNDC4Q9H6D8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.26■□□□□ 0.67
FNDC4Q9H6D8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.26■□□□□ 0.67
FNDC4Q9H6D8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FNDC4Q9H6D8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FNDC4Q9H6D8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
FNDC4Q9H6D8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FNDC4Q9H6D8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FNDC4Q9H6D8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FNDC4Q9H6D8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.25■□□□□ 0.67
FNDC4Q9H6D8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
FNDC4Q9H6D8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
FNDC4Q9H6D8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
FNDC4Q9H6D8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FNDC4Q9H6D8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FNDC4Q9H6D8 ERN1-208ENST00000606895 2068 ntBASIC19.23■□□□□ 0.67
FNDC4Q9H6D8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.23■□□□□ 0.67
FNDC4Q9H6D8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
FNDC4Q9H6D8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC4Q9H6D8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC4Q9H6D8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FNDC4Q9H6D8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.22■□□□□ 0.67
FNDC4Q9H6D8 MIR219A2-201ENST00000608502 1504 ntBASIC19.21■□□□□ 0.67
FNDC4Q9H6D8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC4Q9H6D8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC4Q9H6D8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC4Q9H6D8 AC008813.1-201ENST00000536597 885 ntBASIC19.21■□□□□ 0.67
FNDC4Q9H6D8 DUX4L11-201ENST00000611504 1267 ntBASIC19.21■□□□□ 0.67
FNDC4Q9H6D8 DUX4L12-201ENST00000614593 1267 ntBASIC19.21■□□□□ 0.67
FNDC4Q9H6D8 DUX4L14-201ENST00000621227 1267 ntBASIC19.21■□□□□ 0.67
FNDC4Q9H6D8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC4Q9H6D8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FNDC4Q9H6D8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC4Q9H6D8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC4Q9H6D8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.2■□□□□ 0.66
FNDC4Q9H6D8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC4Q9H6D8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC4Q9H6D8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FNDC4Q9H6D8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 AC010501.1-201ENST00000606270 1962 ntBASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 AC148477.6-201ENST00000623746 465 ntBASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FNDC4Q9H6D8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms