Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HDHD3Q9BSH5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDHD3Q9BSH5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDHD3Q9BSH5 ERN1-208ENST00000606895 2068 ntBASIC20.63■□□□□ 0.89
HDHD3Q9BSH5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HDHD3Q9BSH5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDHD3Q9BSH5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.63■□□□□ 0.89
HDHD3Q9BSH5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDHD3Q9BSH5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDHD3Q9BSH5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.62■□□□□ 0.89
HDHD3Q9BSH5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HDHD3Q9BSH5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.62■□□□□ 0.89
HDHD3Q9BSH5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDHD3Q9BSH5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDHD3Q9BSH5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.61■□□□□ 0.89
HDHD3Q9BSH5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDHD3Q9BSH5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDHD3Q9BSH5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDHD3Q9BSH5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDHD3Q9BSH5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDHD3Q9BSH5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HDHD3Q9BSH5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
HDHD3Q9BSH5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDHD3Q9BSH5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.6■□□□□ 0.89
HDHD3Q9BSH5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDHD3Q9BSH5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDHD3Q9BSH5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDHD3Q9BSH5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDHD3Q9BSH5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.59■□□□□ 0.89
HDHD3Q9BSH5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HDHD3Q9BSH5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.59■□□□□ 0.89
HDHD3Q9BSH5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDHD3Q9BSH5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDHD3Q9BSH5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDHD3Q9BSH5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDHD3Q9BSH5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HDHD3Q9BSH5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HDHD3Q9BSH5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
HDHD3Q9BSH5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
HDHD3Q9BSH5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.58■□□□□ 0.88
HDHD3Q9BSH5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HDHD3Q9BSH5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDHD3Q9BSH5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDHD3Q9BSH5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HDHD3Q9BSH5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.57■□□□□ 0.88
HDHD3Q9BSH5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDHD3Q9BSH5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDHD3Q9BSH5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.56■□□□□ 0.88
HDHD3Q9BSH5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDHD3Q9BSH5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HDHD3Q9BSH5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HDHD3Q9BSH5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDHD3Q9BSH5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HDHD3Q9BSH5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.56■□□□□ 0.88
HDHD3Q9BSH5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.55■□□□□ 0.88
HDHD3Q9BSH5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDHD3Q9BSH5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.55■□□□□ 0.88
HDHD3Q9BSH5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDHD3Q9BSH5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.55■□□□□ 0.88
HDHD3Q9BSH5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDHD3Q9BSH5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HDHD3Q9BSH5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
HDHD3Q9BSH5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.54■□□□□ 0.88
HDHD3Q9BSH5 AC010501.1-201ENST00000606270 1962 ntBASIC20.54■□□□□ 0.88
HDHD3Q9BSH5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.54■□□□□ 0.88
HDHD3Q9BSH5 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.54■□□□□ 0.88
HDHD3Q9BSH5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDHD3Q9BSH5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HDHD3Q9BSH5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HDHD3Q9BSH5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HDHD3Q9BSH5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HDHD3Q9BSH5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.52■□□□□ 0.88
HDHD3Q9BSH5 AC093323.1-202ENST00000635031 2045 ntBASIC20.52■□□□□ 0.88
HDHD3Q9BSH5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HDHD3Q9BSH5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.51■□□□□ 0.87
HDHD3Q9BSH5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HDHD3Q9BSH5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.51■□□□□ 0.87
HDHD3Q9BSH5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.51■□□□□ 0.87
HDHD3Q9BSH5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HDHD3Q9BSH5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.5■□□□□ 0.87
HDHD3Q9BSH5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HDHD3Q9BSH5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HDHD3Q9BSH5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HDHD3Q9BSH5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.49■□□□□ 0.87
HDHD3Q9BSH5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HDHD3Q9BSH5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HDHD3Q9BSH5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HDHD3Q9BSH5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HDHD3Q9BSH5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HDHD3Q9BSH5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HDHD3Q9BSH5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HDHD3Q9BSH5 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HDHD3Q9BSH5 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HDHD3Q9BSH5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HDHD3Q9BSH5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HDHD3Q9BSH5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HDHD3Q9BSH5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HDHD3Q9BSH5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.48■□□□□ 0.87
HDHD3Q9BSH5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.48■□□□□ 0.87
HDHD3Q9BSH5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms