Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF2Q99496 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF2Q99496 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF2Q99496 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF2Q99496 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF2Q99496 ZNRF2P2-203ENST00000454624 420 ntBASIC19.31■□□□□ 0.68
RNF2Q99496 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF2Q99496 AP004609.3-201ENST00000610705 1884 ntBASIC19.31■□□□□ 0.68
RNF2Q99496 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF2Q99496 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF2Q99496 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF2Q99496 ABHD17AP4-201ENST00000411545 909 ntBASIC19.3■□□□□ 0.68
RNF2Q99496 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF2Q99496 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF2Q99496 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RNF2Q99496 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF2Q99496 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF2Q99496 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF2Q99496 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF2Q99496 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF2Q99496 LINC01971-201ENST00000617888 1048 ntBASIC19.29■□□□□ 0.68
RNF2Q99496 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF2Q99496 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF2Q99496 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RNF2Q99496 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF2Q99496 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF2Q99496 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
RNF2Q99496 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF2Q99496 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF2Q99496 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF2Q99496 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF2Q99496 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF2Q99496 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RNF2Q99496 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF2Q99496 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF2Q99496 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF2Q99496 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF2Q99496 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF2Q99496 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNF2Q99496 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNF2Q99496 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF2Q99496 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF2Q99496 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF2Q99496 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF2Q99496 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF2Q99496 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF2Q99496 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF2Q99496 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF2Q99496 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF2Q99496 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RNF2Q99496 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF2Q99496 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF2Q99496 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF2Q99496 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF2Q99496 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF2Q99496 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF2Q99496 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF2Q99496 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF2Q99496 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF2Q99496 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF2Q99496 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF2Q99496 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF2Q99496 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF2Q99496 AC110285.7-201ENST00000624417 1536 ntBASIC19.24■□□□□ 0.67
RNF2Q99496 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF2Q99496 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF2Q99496 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RNF2Q99496 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF2Q99496 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF2Q99496 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF2Q99496 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF2Q99496 DUX4L11-201ENST00000611504 1267 ntBASIC19.22■□□□□ 0.67
RNF2Q99496 DUX4L12-201ENST00000614593 1267 ntBASIC19.22■□□□□ 0.67
RNF2Q99496 DUX4L14-201ENST00000621227 1267 ntBASIC19.22■□□□□ 0.67
RNF2Q99496 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF2Q99496 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF2Q99496 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF2Q99496 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF2Q99496 AC142472.1-201ENST00000612013 1741 ntBASIC19.21■□□□□ 0.67
RNF2Q99496 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF2Q99496 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RNF2Q99496 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF2Q99496 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF2Q99496 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF2Q99496 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF2Q99496 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF2Q99496 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF2Q99496 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF2Q99496 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RNF2Q99496 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF2Q99496 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF2Q99496 DUX4L13-201ENST00000554103 1267 ntBASIC19.19■□□□□ 0.66
RNF2Q99496 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF2Q99496 DUX4L15-201ENST00000611059 1267 ntBASIC19.19■□□□□ 0.66
RNF2Q99496 DUX4L23-201ENST00000615195 1269 ntBASIC19.19■□□□□ 0.66
RNF2Q99496 DUX4L24-201ENST00000617576 1269 ntBASIC19.19■□□□□ 0.66
RNF2Q99496 DUX4L22-201ENST00000618238 1269 ntBASIC19.19■□□□□ 0.66
RNF2Q99496 DUX4L20-201ENST00000619712 1269 ntBASIC19.19■□□□□ 0.66
RNF2Q99496 DUX4L21-201ENST00000622058 1269 ntBASIC19.19■□□□□ 0.66
RNF2Q99496 DUX4L10-201ENST00000622460 1267 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms