Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
NECTIN4Q96NY8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NECTIN4Q96NY8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
NECTIN4Q96NY8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NECTIN4Q96NY8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.82■■□□□ 1.72
NECTIN4Q96NY8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NECTIN4Q96NY8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
NECTIN4Q96NY8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
NECTIN4Q96NY8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.81■■□□□ 1.72
NECTIN4Q96NY8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.81■■□□□ 1.72
NECTIN4Q96NY8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NECTIN4Q96NY8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.8■■□□□ 1.72
NECTIN4Q96NY8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NECTIN4Q96NY8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NECTIN4Q96NY8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.8■■□□□ 1.72
NECTIN4Q96NY8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
NECTIN4Q96NY8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NECTIN4Q96NY8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NECTIN4Q96NY8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.79■■□□□ 1.72
NECTIN4Q96NY8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NECTIN4Q96NY8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
NECTIN4Q96NY8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
NECTIN4Q96NY8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.79■■□□□ 1.72
NECTIN4Q96NY8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NECTIN4Q96NY8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
NECTIN4Q96NY8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.78■■□□□ 1.72
NECTIN4Q96NY8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
NECTIN4Q96NY8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
NECTIN4Q96NY8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
NECTIN4Q96NY8 Z92544.1-202ENST00000571933 1220 ntBASIC25.77■■□□□ 1.72
NECTIN4Q96NY8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
NECTIN4Q96NY8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.77■■□□□ 1.72
NECTIN4Q96NY8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NECTIN4Q96NY8 AP002414.2-202ENST00000590929 1450 ntBASIC25.77■■□□□ 1.72
NECTIN4Q96NY8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
NECTIN4Q96NY8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.76■■□□□ 1.71
NECTIN4Q96NY8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
NECTIN4Q96NY8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NECTIN4Q96NY8 AC239859.2-201ENST00000444165 318 ntBASIC25.75■■□□□ 1.71
NECTIN4Q96NY8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.75■■□□□ 1.71
NECTIN4Q96NY8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.75■■□□□ 1.71
NECTIN4Q96NY8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
NECTIN4Q96NY8 AL359504.2-201ENST00000605506 1601 ntBASIC25.74■■□□□ 1.71
NECTIN4Q96NY8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NECTIN4Q96NY8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NECTIN4Q96NY8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.74■■□□□ 1.71
NECTIN4Q96NY8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NECTIN4Q96NY8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.74■■□□□ 1.71
NECTIN4Q96NY8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NECTIN4Q96NY8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.73■■□□□ 1.71
NECTIN4Q96NY8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NECTIN4Q96NY8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.72■■□□□ 1.71
NECTIN4Q96NY8 AC087393.1-201ENST00000582896 145 ntBASIC25.72■■□□□ 1.71
NECTIN4Q96NY8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NECTIN4Q96NY8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.72■■□□□ 1.71
NECTIN4Q96NY8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
NECTIN4Q96NY8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
NECTIN4Q96NY8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NECTIN4Q96NY8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NECTIN4Q96NY8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.71■■□□□ 1.71
NECTIN4Q96NY8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.71■■□□□ 1.71
NECTIN4Q96NY8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NECTIN4Q96NY8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.7■■□□□ 1.71
NECTIN4Q96NY8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
NECTIN4Q96NY8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NECTIN4Q96NY8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
NECTIN4Q96NY8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
NECTIN4Q96NY8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.7■■□□□ 1.7
NECTIN4Q96NY8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.7■■□□□ 1.7
NECTIN4Q96NY8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.69■■□□□ 1.7
NECTIN4Q96NY8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
NECTIN4Q96NY8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.69■■□□□ 1.7
NECTIN4Q96NY8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NECTIN4Q96NY8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NECTIN4Q96NY8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NECTIN4Q96NY8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.68■■□□□ 1.7
NECTIN4Q96NY8 AC008406.3-201ENST00000620001 1374 ntBASIC25.68■■□□□ 1.7
NECTIN4Q96NY8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.67■■□□□ 1.7
NECTIN4Q96NY8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NECTIN4Q96NY8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
NECTIN4Q96NY8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NECTIN4Q96NY8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.66■■□□□ 1.7
NECTIN4Q96NY8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.66■■□□□ 1.7
NECTIN4Q96NY8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NECTIN4Q96NY8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.65■■□□□ 1.7
NECTIN4Q96NY8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NECTIN4Q96NY8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.65■■□□□ 1.7
NECTIN4Q96NY8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.64■■□□□ 1.7
NECTIN4Q96NY8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NECTIN4Q96NY8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NECTIN4Q96NY8 ABCB10P3-201ENST00000561950 2166 ntBASIC25.63■■□□□ 1.69
NECTIN4Q96NY8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
NECTIN4Q96NY8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.63■■□□□ 1.69
NECTIN4Q96NY8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.63■■□□□ 1.69
NECTIN4Q96NY8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.63■■□□□ 1.69
NECTIN4Q96NY8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.63■■□□□ 1.69
NECTIN4Q96NY8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
NECTIN4Q96NY8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NECTIN4Q96NY8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.62■■□□□ 1.69
NECTIN4Q96NY8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms