Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM56Q96MV1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM56Q96MV1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM56Q96MV1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.1■□□□□ 0.81
TMEM56Q96MV1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.1■□□□□ 0.81
TMEM56Q96MV1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TMEM56Q96MV1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEM56Q96MV1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56Q96MV1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM56Q96MV1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM56Q96MV1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.08■□□□□ 0.81
TMEM56Q96MV1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEM56Q96MV1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM56Q96MV1 AC010501.1-201ENST00000606270 1962 ntBASIC20.08■□□□□ 0.8
TMEM56Q96MV1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TMEM56Q96MV1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM56Q96MV1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM56Q96MV1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM56Q96MV1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM56Q96MV1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 AC142381.3-201ENST00000568208 1670 ntBASIC20.05■□□□□ 0.8
TMEM56Q96MV1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
TMEM56Q96MV1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM56Q96MV1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TMEM56Q96MV1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM56Q96MV1 AC110285.7-201ENST00000624417 1536 ntBASIC20.04■□□□□ 0.8
TMEM56Q96MV1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM56Q96MV1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM56Q96MV1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM56Q96MV1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM56Q96MV1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TMEM56Q96MV1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 AC044849.2-201ENST00000606596 710 ntBASIC20.02■□□□□ 0.8
TMEM56Q96MV1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56Q96MV1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM56Q96MV1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
TMEM56Q96MV1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
TMEM56Q96MV1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM56Q96MV1 AC087741.3-201ENST00000624270 1347 ntBASIC20.01■□□□□ 0.79
TMEM56Q96MV1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20■□□□□ 0.79
TMEM56Q96MV1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.99■□□□□ 0.79
TMEM56Q96MV1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM56Q96MV1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM56Q96MV1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM56Q96MV1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM56Q96MV1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM56Q96MV1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM56Q96MV1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM56Q96MV1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM56Q96MV1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM56Q96MV1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM56Q96MV1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM56Q96MV1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM56Q96MV1 AL162393.1-201ENST00000437852 946 ntBASIC19.95■□□□□ 0.78
TMEM56Q96MV1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM56Q96MV1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM56Q96MV1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM56Q96MV1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM56Q96MV1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms