Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 KRT18P60-201ENST00000312876 1297 ntBASIC20.63■□□□□ 0.89
TIMD4Q96H15 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.63■□□□□ 0.89
TIMD4Q96H15 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TIMD4Q96H15 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TIMD4Q96H15 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.62■□□□□ 0.89
TIMD4Q96H15 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.62■□□□□ 0.89
TIMD4Q96H15 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TIMD4Q96H15 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMD4Q96H15 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMD4Q96H15 BX255925.1-201ENST00000566954 1854 ntBASIC20.61■□□□□ 0.89
TIMD4Q96H15 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMD4Q96H15 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TIMD4Q96H15 AC026202.3-201ENST00000600805 1127 ntBASIC20.61■□□□□ 0.89
TIMD4Q96H15 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMD4Q96H15 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMD4Q96H15 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMD4Q96H15 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TIMD4Q96H15 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TIMD4Q96H15 TSPY13P-201ENST00000338964 914 ntBASIC20.6■□□□□ 0.89
TIMD4Q96H15 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TIMD4Q96H15 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TIMD4Q96H15 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TIMD4Q96H15 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TIMD4Q96H15 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TIMD4Q96H15 AC142086.6-201ENST00000621154 1765 ntBASIC20.59■□□□□ 0.89
TIMD4Q96H15 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TIMD4Q96H15 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TIMD4Q96H15 AL592293.1-201ENST00000502889 1188 ntBASIC20.59■□□□□ 0.89
TIMD4Q96H15 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.59■□□□□ 0.89
TIMD4Q96H15 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TIMD4Q96H15 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TIMD4Q96H15 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
TIMD4Q96H15 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TIMD4Q96H15 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TIMD4Q96H15 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
TIMD4Q96H15 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TIMD4Q96H15 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TIMD4Q96H15 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMD4Q96H15 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.57■□□□□ 0.88
TIMD4Q96H15 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TIMD4Q96H15 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TIMD4Q96H15 AL033527.3-201ENST00000566366 1196 ntBASIC20.57■□□□□ 0.88
TIMD4Q96H15 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.57■□□□□ 0.88
TIMD4Q96H15 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMD4Q96H15 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMD4Q96H15 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TIMD4Q96H15 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMD4Q96H15 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TIMD4Q96H15 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMD4Q96H15 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TIMD4Q96H15 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMD4Q96H15 ATP5G2P3-201ENST00000429083 425 ntBASIC20.56■□□□□ 0.88
TIMD4Q96H15 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TIMD4Q96H15 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMD4Q96H15 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMD4Q96H15 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMD4Q96H15 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TIMD4Q96H15 RAP2CP1-202ENST00000605179 643 ntBASIC20.55■□□□□ 0.88
TIMD4Q96H15 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.55■□□□□ 0.88
TIMD4Q96H15 AL449106.1-201ENST00000608517 1980 ntBASIC20.55■□□□□ 0.88
TIMD4Q96H15 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.55■□□□□ 0.88
TIMD4Q96H15 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TIMD4Q96H15 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TIMD4Q96H15 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TIMD4Q96H15 AC004987.1-201ENST00000428627 508 ntBASIC20.54■□□□□ 0.88
TIMD4Q96H15 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.54■□□□□ 0.88
TIMD4Q96H15 AC129492.7-201ENST00000622992 756 ntBASIC20.54■□□□□ 0.88
TIMD4Q96H15 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TIMD4Q96H15 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.54■□□□□ 0.88
TIMD4Q96H15 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TIMD4Q96H15 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMD4Q96H15 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.53■□□□□ 0.88
TIMD4Q96H15 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TIMD4Q96H15 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMD4Q96H15 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TIMD4Q96H15 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TIMD4Q96H15 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMD4Q96H15 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TIMD4Q96H15 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TIMD4Q96H15 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TIMD4Q96H15 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.52■□□□□ 0.88
TIMD4Q96H15 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
TIMD4Q96H15 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.52■□□□□ 0.87
TIMD4Q96H15 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
TIMD4Q96H15 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMD4Q96H15 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TIMD4Q96H15 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.49■□□□□ 0.87
TIMD4Q96H15 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMD4Q96H15 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIMD4Q96H15 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMD4Q96H15 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMD4Q96H15 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TIMD4Q96H15 AC018755.3-202ENST00000596210 929 ntBASIC20.49■□□□□ 0.87
TIMD4Q96H15 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TIMD4Q96H15 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMD4Q96H15 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMD4Q96H15 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
TIMD4Q96H15 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TIMD4Q96H15 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMD4Q96H15 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms