Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23■■□□□ 1.27
SLC47A1Q96FL8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
SLC47A1Q96FL8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC47A1Q96FL8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23■■□□□ 1.27
SLC47A1Q96FL8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23■■□□□ 1.27
SLC47A1Q96FL8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SLC47A1Q96FL8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC47A1Q96FL8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC47A1Q96FL8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC47A1Q96FL8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.99■■□□□ 1.27
SLC47A1Q96FL8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC47A1Q96FL8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SLC47A1Q96FL8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC47A1Q96FL8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SLC47A1Q96FL8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
SLC47A1Q96FL8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.97■■□□□ 1.27
SLC47A1Q96FL8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SLC47A1Q96FL8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SLC47A1Q96FL8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.97■■□□□ 1.27
SLC47A1Q96FL8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SLC47A1Q96FL8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SLC47A1Q96FL8 RPS2P35-201ENST00000443417 897 ntBASIC22.96■■□□□ 1.27
SLC47A1Q96FL8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.96■■□□□ 1.27
SLC47A1Q96FL8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SLC47A1Q96FL8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SLC47A1Q96FL8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SLC47A1Q96FL8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SLC47A1Q96FL8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SLC47A1Q96FL8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
SLC47A1Q96FL8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.94■■□□□ 1.26
SLC47A1Q96FL8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.94■■□□□ 1.26
SLC47A1Q96FL8 ERN1-208ENST00000606895 2068 ntBASIC22.94■■□□□ 1.26
SLC47A1Q96FL8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SLC47A1Q96FL8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
SLC47A1Q96FL8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
SLC47A1Q96FL8 WHAMMP3-201ENST00000611636 1609 ntBASIC22.93■■□□□ 1.26
SLC47A1Q96FL8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SLC47A1Q96FL8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.93■■□□□ 1.26
SLC47A1Q96FL8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SLC47A1Q96FL8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SLC47A1Q96FL8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
SLC47A1Q96FL8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SLC47A1Q96FL8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.92■■□□□ 1.26
SLC47A1Q96FL8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
SLC47A1Q96FL8 AC110285.7-201ENST00000624417 1536 ntBASIC22.92■■□□□ 1.26
SLC47A1Q96FL8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
SLC47A1Q96FL8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SLC47A1Q96FL8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SLC47A1Q96FL8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
SLC47A1Q96FL8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.91■■□□□ 1.26
SLC47A1Q96FL8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
SLC47A1Q96FL8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SLC47A1Q96FL8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
SLC47A1Q96FL8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.9■■□□□ 1.26
SLC47A1Q96FL8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SLC47A1Q96FL8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
SLC47A1Q96FL8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
SLC47A1Q96FL8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SLC47A1Q96FL8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SLC47A1Q96FL8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SLC47A1Q96FL8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SLC47A1Q96FL8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SLC47A1Q96FL8 AC010501.1-201ENST00000606270 1962 ntBASIC22.87■■□□□ 1.25
SLC47A1Q96FL8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC47A1Q96FL8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC47A1Q96FL8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
SLC47A1Q96FL8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC47A1Q96FL8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SLC47A1Q96FL8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
SLC47A1Q96FL8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.86■■□□□ 1.25
SLC47A1Q96FL8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SLC47A1Q96FL8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SLC47A1Q96FL8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.86■■□□□ 1.25
SLC47A1Q96FL8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SLC47A1Q96FL8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.86■■□□□ 1.25
SLC47A1Q96FL8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.86■■□□□ 1.25
SLC47A1Q96FL8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SLC47A1Q96FL8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.85■■□□□ 1.25
SLC47A1Q96FL8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.85■■□□□ 1.25
SLC47A1Q96FL8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SLC47A1Q96FL8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.84■■□□□ 1.25
SLC47A1Q96FL8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.84■■□□□ 1.25
SLC47A1Q96FL8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC47A1Q96FL8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.84■■□□□ 1.25
SLC47A1Q96FL8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
SLC47A1Q96FL8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC47A1Q96FL8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SLC47A1Q96FL8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC47A1Q96FL8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC47A1Q96FL8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC47A1Q96FL8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.83■■□□□ 1.25
SLC47A1Q96FL8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.83■■□□□ 1.25
SLC47A1Q96FL8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC47A1Q96FL8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC47A1Q96FL8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.83■■□□□ 1.25
SLC47A1Q96FL8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SLC47A1Q96FL8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SLC47A1Q96FL8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SLC47A1Q96FL8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC47A1Q96FL8 AC142381.3-201ENST00000568208 1670 ntBASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms