Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
MBD3L1Q8WWY6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L1Q8WWY6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L1Q8WWY6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L1Q8WWY6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L1Q8WWY6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L1Q8WWY6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L1Q8WWY6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L1Q8WWY6 AC022211.4-201ENST00000625094 2161 ntBASIC19.26■□□□□ 0.67
MBD3L1Q8WWY6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L1Q8WWY6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L1Q8WWY6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L1Q8WWY6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L1Q8WWY6 AC135983.2-203ENST00000454486 1613 ntBASIC19.25■□□□□ 0.67
MBD3L1Q8WWY6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.24■□□□□ 0.67
MBD3L1Q8WWY6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MBD3L1Q8WWY6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3L1Q8WWY6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3L1Q8WWY6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MBD3L1Q8WWY6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3L1Q8WWY6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L1Q8WWY6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
MBD3L1Q8WWY6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD3L1Q8WWY6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
MBD3L1Q8WWY6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD3L1Q8WWY6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MBD3L1Q8WWY6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD3L1Q8WWY6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.2■□□□□ 0.66
MBD3L1Q8WWY6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MBD3L1Q8WWY6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.2■□□□□ 0.66
MBD3L1Q8WWY6 AP002365.1-201ENST00000603448 772 ntBASIC19.2■□□□□ 0.66
MBD3L1Q8WWY6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD3L1Q8WWY6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD3L1Q8WWY6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD3L1Q8WWY6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD3L1Q8WWY6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
MBD3L1Q8WWY6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD3L1Q8WWY6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD3L1Q8WWY6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD3L1Q8WWY6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
MBD3L1Q8WWY6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.19■□□□□ 0.66
MBD3L1Q8WWY6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD3L1Q8WWY6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD3L1Q8WWY6 LINC00543-201ENST00000567234 1845 ntBASIC19.18■□□□□ 0.66
MBD3L1Q8WWY6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD3L1Q8WWY6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD3L1Q8WWY6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD3L1Q8WWY6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.18■□□□□ 0.66
MBD3L1Q8WWY6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
MBD3L1Q8WWY6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD3L1Q8WWY6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
MBD3L1Q8WWY6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD3L1Q8WWY6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD3L1Q8WWY6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MBD3L1Q8WWY6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD3L1Q8WWY6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MBD3L1Q8WWY6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MBD3L1Q8WWY6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD3L1Q8WWY6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD3L1Q8WWY6 AC068473.5-201ENST00000616428 2072 ntBASIC19.16■□□□□ 0.66
MBD3L1Q8WWY6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD3L1Q8WWY6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD3L1Q8WWY6 WHAMMP3-201ENST00000611636 1609 ntBASIC19.16■□□□□ 0.66
MBD3L1Q8WWY6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD3L1Q8WWY6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.16■□□□□ 0.66
MBD3L1Q8WWY6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.16■□□□□ 0.66
MBD3L1Q8WWY6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L1Q8WWY6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L1Q8WWY6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L1Q8WWY6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD3L1Q8WWY6 WHAMMP2-203ENST00000563942 1603 ntBASIC19.14■□□□□ 0.66
MBD3L1Q8WWY6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 AC079834.2-201ENST00000609776 1949 ntBASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.14■□□□□ 0.65
MBD3L1Q8WWY6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3L1Q8WWY6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD3L1Q8WWY6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3L1Q8WWY6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD3L1Q8WWY6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
MBD3L1Q8WWY6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3L1Q8WWY6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD3L1Q8WWY6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms