Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 AC009831.1-201ENST00000580420 1582 ntBASIC25.95■■□□□ 1.74
DEPDC1BQ8WUY9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DEPDC1BQ8WUY9 RARRES2P1-201ENST00000474487 481 ntBASIC25.94■■□□□ 1.74
DEPDC1BQ8WUY9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
DEPDC1BQ8WUY9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
DEPDC1BQ8WUY9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.93■■□□□ 1.74
DEPDC1BQ8WUY9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DEPDC1BQ8WUY9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
DEPDC1BQ8WUY9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DEPDC1BQ8WUY9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
DEPDC1BQ8WUY9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
DEPDC1BQ8WUY9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.91■■□□□ 1.74
DEPDC1BQ8WUY9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
DEPDC1BQ8WUY9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DEPDC1BQ8WUY9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
DEPDC1BQ8WUY9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.91■■□□□ 1.74
DEPDC1BQ8WUY9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.91■■□□□ 1.74
DEPDC1BQ8WUY9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DEPDC1BQ8WUY9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
DEPDC1BQ8WUY9 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.9■■□□□ 1.74
DEPDC1BQ8WUY9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
DEPDC1BQ8WUY9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
DEPDC1BQ8WUY9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.89■■□□□ 1.74
DEPDC1BQ8WUY9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.89■■□□□ 1.74
DEPDC1BQ8WUY9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
DEPDC1BQ8WUY9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
DEPDC1BQ8WUY9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.89■■□□□ 1.74
DEPDC1BQ8WUY9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
DEPDC1BQ8WUY9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
DEPDC1BQ8WUY9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.89■■□□□ 1.74
DEPDC1BQ8WUY9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.89■■□□□ 1.74
DEPDC1BQ8WUY9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.89■■□□□ 1.74
DEPDC1BQ8WUY9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
DEPDC1BQ8WUY9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DEPDC1BQ8WUY9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
DEPDC1BQ8WUY9 AC025884.2-201ENST00000553429 711 ntBASIC25.88■■□□□ 1.73
DEPDC1BQ8WUY9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DEPDC1BQ8WUY9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DEPDC1BQ8WUY9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
DEPDC1BQ8WUY9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
DEPDC1BQ8WUY9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DEPDC1BQ8WUY9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.87■■□□□ 1.73
DEPDC1BQ8WUY9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.87■■□□□ 1.73
DEPDC1BQ8WUY9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
DEPDC1BQ8WUY9 LINC01003-201ENST00000564834 1764 ntBASIC25.87■■□□□ 1.73
DEPDC1BQ8WUY9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
DEPDC1BQ8WUY9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
DEPDC1BQ8WUY9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DEPDC1BQ8WUY9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.86■■□□□ 1.73
DEPDC1BQ8WUY9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DEPDC1BQ8WUY9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
DEPDC1BQ8WUY9 AC026202.3-201ENST00000600805 1127 ntBASIC25.86■■□□□ 1.73
DEPDC1BQ8WUY9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
DEPDC1BQ8WUY9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.86■■□□□ 1.73
DEPDC1BQ8WUY9 BX255925.1-201ENST00000566954 1854 ntBASIC25.85■■□□□ 1.73
DEPDC1BQ8WUY9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
DEPDC1BQ8WUY9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DEPDC1BQ8WUY9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.85■■□□□ 1.73
DEPDC1BQ8WUY9 DUX4L18-201ENST00000553347 1267 ntBASIC25.85■■□□□ 1.73
DEPDC1BQ8WUY9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
DEPDC1BQ8WUY9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
DEPDC1BQ8WUY9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
DEPDC1BQ8WUY9 AL121749.1-202ENST00000609313 2153 ntBASIC25.84■■□□□ 1.73
DEPDC1BQ8WUY9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
DEPDC1BQ8WUY9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DEPDC1BQ8WUY9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DEPDC1BQ8WUY9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DEPDC1BQ8WUY9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
DEPDC1BQ8WUY9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.83■■□□□ 1.73
DEPDC1BQ8WUY9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
DEPDC1BQ8WUY9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.83■■□□□ 1.73
DEPDC1BQ8WUY9 RP9P-202ENST00000450133 1212 ntBASIC25.83■■□□□ 1.73
DEPDC1BQ8WUY9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.83■■□□□ 1.73
DEPDC1BQ8WUY9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.83■■□□□ 1.73
DEPDC1BQ8WUY9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DEPDC1BQ8WUY9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.72
DEPDC1BQ8WUY9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
DEPDC1BQ8WUY9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.82■■□□□ 1.72
DEPDC1BQ8WUY9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
DEPDC1BQ8WUY9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
DEPDC1BQ8WUY9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DEPDC1BQ8WUY9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.81■■□□□ 1.72
DEPDC1BQ8WUY9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
DEPDC1BQ8WUY9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
DEPDC1BQ8WUY9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
DEPDC1BQ8WUY9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
DEPDC1BQ8WUY9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.79■■□□□ 1.72
DEPDC1BQ8WUY9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.79■■□□□ 1.72
DEPDC1BQ8WUY9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DEPDC1BQ8WUY9 AC093536.1-201ENST00000569153 554 ntBASIC25.77■■□□□ 1.72
DEPDC1BQ8WUY9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DEPDC1BQ8WUY9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DEPDC1BQ8WUY9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.76■■□□□ 1.71
DEPDC1BQ8WUY9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
DEPDC1BQ8WUY9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
DEPDC1BQ8WUY9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
DEPDC1BQ8WUY9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.75■■□□□ 1.71
DEPDC1BQ8WUY9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DEPDC1BQ8WUY9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
DEPDC1BQ8WUY9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms