Protein–RNA interactions for Protein: Q8TCA0

LRRC20, Leucine-rich repeat-containing protein 20, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20Q8TCA0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC20Q8TCA0 AP004833.2-201ENST00000532228 1454 ntBASIC20.43■□□□□ 0.86
LRRC20Q8TCA0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC20Q8TCA0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC20Q8TCA0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC20Q8TCA0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC20Q8TCA0 DUSP8P4-201ENST00000399538 1761 ntBASIC20.42■□□□□ 0.86
LRRC20Q8TCA0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC20Q8TCA0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRC20Q8TCA0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRC20Q8TCA0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC20Q8TCA0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC20Q8TCA0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC20Q8TCA0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC20Q8TCA0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
LRRC20Q8TCA0 ERN1-208ENST00000606895 2068 ntBASIC20.41■□□□□ 0.86
LRRC20Q8TCA0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC20Q8TCA0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC20Q8TCA0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC20Q8TCA0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC20Q8TCA0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC20Q8TCA0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC20Q8TCA0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LRRC20Q8TCA0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.39■□□□□ 0.85
LRRC20Q8TCA0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC20Q8TCA0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC20Q8TCA0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC20Q8TCA0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC20Q8TCA0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC20Q8TCA0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC20Q8TCA0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC20Q8TCA0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC20Q8TCA0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC20Q8TCA0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC20Q8TCA0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC20Q8TCA0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC20Q8TCA0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC20Q8TCA0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC20Q8TCA0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC20Q8TCA0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC20Q8TCA0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC20Q8TCA0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC20Q8TCA0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC20Q8TCA0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC20Q8TCA0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC20Q8TCA0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC20Q8TCA0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC20Q8TCA0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC20Q8TCA0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
LRRC20Q8TCA0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC20Q8TCA0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.33■□□□□ 0.85
LRRC20Q8TCA0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRC20Q8TCA0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.33■□□□□ 0.84
LRRC20Q8TCA0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC20Q8TCA0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC20Q8TCA0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.32■□□□□ 0.84
LRRC20Q8TCA0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC20Q8TCA0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LRRC20Q8TCA0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC20Q8TCA0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC20Q8TCA0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.31■□□□□ 0.84
LRRC20Q8TCA0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC20Q8TCA0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC20Q8TCA0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC20Q8TCA0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC20Q8TCA0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LRRC20Q8TCA0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.3■□□□□ 0.84
LRRC20Q8TCA0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.3■□□□□ 0.84
LRRC20Q8TCA0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC20Q8TCA0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC20Q8TCA0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LRRC20Q8TCA0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC20Q8TCA0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LRRC20Q8TCA0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.3■□□□□ 0.84
LRRC20Q8TCA0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRC20Q8TCA0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC20Q8TCA0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC20Q8TCA0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC20Q8TCA0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms