Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.18■■□□□ 1.46
HMGCLL1Q8TB92 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
HMGCLL1Q8TB92 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.17■■□□□ 1.46
HMGCLL1Q8TB92 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
HMGCLL1Q8TB92 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.17■■□□□ 1.46
HMGCLL1Q8TB92 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
HMGCLL1Q8TB92 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
HMGCLL1Q8TB92 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HMGCLL1Q8TB92 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HMGCLL1Q8TB92 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HMGCLL1Q8TB92 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.16■■□□□ 1.46
HMGCLL1Q8TB92 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
HMGCLL1Q8TB92 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.15■■□□□ 1.46
HMGCLL1Q8TB92 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HMGCLL1Q8TB92 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.14■■□□□ 1.45
HMGCLL1Q8TB92 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.14■■□□□ 1.45
HMGCLL1Q8TB92 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.14■■□□□ 1.45
HMGCLL1Q8TB92 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
HMGCLL1Q8TB92 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
HMGCLL1Q8TB92 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
HMGCLL1Q8TB92 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HMGCLL1Q8TB92 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
HMGCLL1Q8TB92 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.12■■□□□ 1.45
HMGCLL1Q8TB92 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
HMGCLL1Q8TB92 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.12■■□□□ 1.45
HMGCLL1Q8TB92 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HMGCLL1Q8TB92 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HMGCLL1Q8TB92 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HMGCLL1Q8TB92 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HMGCLL1Q8TB92 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.11■■□□□ 1.45
HMGCLL1Q8TB92 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.1■■□□□ 1.45
HMGCLL1Q8TB92 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
HMGCLL1Q8TB92 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.1■■□□□ 1.45
HMGCLL1Q8TB92 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HMGCLL1Q8TB92 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.1■■□□□ 1.45
HMGCLL1Q8TB92 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HMGCLL1Q8TB92 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
HMGCLL1Q8TB92 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.1■■□□□ 1.45
HMGCLL1Q8TB92 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HMGCLL1Q8TB92 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.09■■□□□ 1.45
HMGCLL1Q8TB92 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.09■■□□□ 1.45
HMGCLL1Q8TB92 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.09■■□□□ 1.45
HMGCLL1Q8TB92 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.09■■□□□ 1.45
HMGCLL1Q8TB92 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HMGCLL1Q8TB92 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.09■■□□□ 1.45
HMGCLL1Q8TB92 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HMGCLL1Q8TB92 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
HMGCLL1Q8TB92 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.09■■□□□ 1.45
HMGCLL1Q8TB92 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
HMGCLL1Q8TB92 AC126177.7-201ENST00000547904 679 ntBASIC24.08■■□□□ 1.45
HMGCLL1Q8TB92 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.45
HMGCLL1Q8TB92 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HMGCLL1Q8TB92 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
HMGCLL1Q8TB92 AC145676.1-201ENST00000514988 2004 ntBASIC24.08■■□□□ 1.44
HMGCLL1Q8TB92 AC020928.2-201ENST00000588717 2197 ntBASIC24.08■■□□□ 1.44
HMGCLL1Q8TB92 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.07■■□□□ 1.44
HMGCLL1Q8TB92 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.07■■□□□ 1.44
HMGCLL1Q8TB92 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCLL1Q8TB92 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCLL1Q8TB92 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCLL1Q8TB92 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
HMGCLL1Q8TB92 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HMGCLL1Q8TB92 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HMGCLL1Q8TB92 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HMGCLL1Q8TB92 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.06■■□□□ 1.44
HMGCLL1Q8TB92 WHAMMP3-201ENST00000611636 1609 ntBASIC24.06■■□□□ 1.44
HMGCLL1Q8TB92 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.05■■□□□ 1.44
HMGCLL1Q8TB92 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HMGCLL1Q8TB92 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.05■■□□□ 1.44
HMGCLL1Q8TB92 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HMGCLL1Q8TB92 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HMGCLL1Q8TB92 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HMGCLL1Q8TB92 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
HMGCLL1Q8TB92 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
HMGCLL1Q8TB92 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
HMGCLL1Q8TB92 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HMGCLL1Q8TB92 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HMGCLL1Q8TB92 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HMGCLL1Q8TB92 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.04■■□□□ 1.44
HMGCLL1Q8TB92 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HMGCLL1Q8TB92 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.03■■□□□ 1.44
HMGCLL1Q8TB92 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
HMGCLL1Q8TB92 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HMGCLL1Q8TB92 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HMGCLL1Q8TB92 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.02■■□□□ 1.44
HMGCLL1Q8TB92 AC060814.1-201ENST00000554326 538 ntBASIC24.02■■□□□ 1.44
HMGCLL1Q8TB92 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
HMGCLL1Q8TB92 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HMGCLL1Q8TB92 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.02■■□□□ 1.44
HMGCLL1Q8TB92 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.02■■□□□ 1.44
HMGCLL1Q8TB92 AL359258.2-201ENST00000564063 1566 ntBASIC24.01■■□□□ 1.43
HMGCLL1Q8TB92 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
HMGCLL1Q8TB92 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
HMGCLL1Q8TB92 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.01■■□□□ 1.43
HMGCLL1Q8TB92 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HMGCLL1Q8TB92 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24■■□□□ 1.43
HMGCLL1Q8TB92 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
HMGCLL1Q8TB92 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
HMGCLL1Q8TB92 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
HMGCLL1Q8TB92 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms