Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DNAAF1Q8NEP3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.41■■□□□ 1.02
DNAAF1Q8NEP3 AC093323.1-202ENST00000635031 2045 ntBASIC21.41■■□□□ 1.02
DNAAF1Q8NEP3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
DNAAF1Q8NEP3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DNAAF1Q8NEP3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.41■■□□□ 1.02
DNAAF1Q8NEP3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
DNAAF1Q8NEP3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
DNAAF1Q8NEP3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
DNAAF1Q8NEP3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DNAAF1Q8NEP3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DNAAF1Q8NEP3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.4■■□□□ 1.02
DNAAF1Q8NEP3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
DNAAF1Q8NEP3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DNAAF1Q8NEP3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DNAAF1Q8NEP3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
DNAAF1Q8NEP3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DNAAF1Q8NEP3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
DNAAF1Q8NEP3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DNAAF1Q8NEP3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DNAAF1Q8NEP3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
DNAAF1Q8NEP3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.37■■□□□ 1.01
DNAAF1Q8NEP3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DNAAF1Q8NEP3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DNAAF1Q8NEP3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DNAAF1Q8NEP3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DNAAF1Q8NEP3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.37■■□□□ 1.01
DNAAF1Q8NEP3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
DNAAF1Q8NEP3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DNAAF1Q8NEP3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DNAAF1Q8NEP3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DNAAF1Q8NEP3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DNAAF1Q8NEP3 AC142472.1-201ENST00000612013 1741 ntBASIC21.36■■□□□ 1.01
DNAAF1Q8NEP3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
DNAAF1Q8NEP3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.36■■□□□ 1.01
DNAAF1Q8NEP3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DNAAF1Q8NEP3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.35■■□□□ 1.01
DNAAF1Q8NEP3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DNAAF1Q8NEP3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DNAAF1Q8NEP3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DNAAF1Q8NEP3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DNAAF1Q8NEP3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DNAAF1Q8NEP3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.32■■□□□ 1
DNAAF1Q8NEP3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
DNAAF1Q8NEP3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DNAAF1Q8NEP3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.31■■□□□ 1
DNAAF1Q8NEP3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.31■■□□□ 1
DNAAF1Q8NEP3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.31■■□□□ 1
DNAAF1Q8NEP3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DNAAF1Q8NEP3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.31■■□□□ 1
DNAAF1Q8NEP3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.31■■□□□ 1
DNAAF1Q8NEP3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
DNAAF1Q8NEP3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
DNAAF1Q8NEP3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 WHAMMP3-201ENST00000611636 1609 ntBASIC21.3■■□□□ 1
DNAAF1Q8NEP3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.3■■□□□ 1
DNAAF1Q8NEP3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DNAAF1Q8NEP3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.29■■□□□ 1
DNAAF1Q8NEP3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.29■■□□□ 1
DNAAF1Q8NEP3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
DNAAF1Q8NEP3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.29■■□□□ 1
DNAAF1Q8NEP3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DNAAF1Q8NEP3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.28■■□□□ 1
DNAAF1Q8NEP3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.28■■□□□ 1
DNAAF1Q8NEP3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.27■■□□□ 1
DNAAF1Q8NEP3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.27■■□□□ 1
DNAAF1Q8NEP3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
DNAAF1Q8NEP3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.27■■□□□ 1
DNAAF1Q8NEP3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
DNAAF1Q8NEP3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
DNAAF1Q8NEP3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.27■□□□□ 0.99
DNAAF1Q8NEP3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DNAAF1Q8NEP3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNAAF1Q8NEP3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNAAF1Q8NEP3 ERN1-208ENST00000606895 2068 ntBASIC21.26■□□□□ 0.99
DNAAF1Q8NEP3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
DNAAF1Q8NEP3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.26■□□□□ 0.99
DNAAF1Q8NEP3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.26■□□□□ 0.99
DNAAF1Q8NEP3 LINC01971-201ENST00000617888 1048 ntBASIC21.26■□□□□ 0.99
DNAAF1Q8NEP3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
DNAAF1Q8NEP3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DNAAF1Q8NEP3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNAAF1Q8NEP3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DNAAF1Q8NEP3 RPS2P35-201ENST00000443417 897 ntBASIC21.25■□□□□ 0.99
DNAAF1Q8NEP3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.25■□□□□ 0.99
DNAAF1Q8NEP3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNAAF1Q8NEP3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNAAF1Q8NEP3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DNAAF1Q8NEP3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DNAAF1Q8NEP3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.24■□□□□ 0.99
DNAAF1Q8NEP3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms