Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF439Q8NDP4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF439Q8NDP4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF439Q8NDP4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 MIR7108-201ENST00000614319 87 ntBASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.2■□□□□ 0.82
ZNF439Q8NDP4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ZNF439Q8NDP4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF439Q8NDP4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF439Q8NDP4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZNF439Q8NDP4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF439Q8NDP4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
ZNF439Q8NDP4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF439Q8NDP4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF439Q8NDP4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF439Q8NDP4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF439Q8NDP4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ZNF439Q8NDP4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF439Q8NDP4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF439Q8NDP4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF439Q8NDP4 AC135731.1-201ENST00000569415 2548 ntBASIC20.17■□□□□ 0.82
ZNF439Q8NDP4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF439Q8NDP4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF439Q8NDP4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF439Q8NDP4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF439Q8NDP4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF439Q8NDP4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF439Q8NDP4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF439Q8NDP4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF439Q8NDP4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
ZNF439Q8NDP4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZNF439Q8NDP4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ZNF439Q8NDP4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF439Q8NDP4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF439Q8NDP4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF439Q8NDP4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF439Q8NDP4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF439Q8NDP4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF439Q8NDP4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF439Q8NDP4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.14■□□□□ 0.82
ZNF439Q8NDP4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF439Q8NDP4 AC091060.1-201ENST00000623524 1766 ntBASIC20.14■□□□□ 0.81
ZNF439Q8NDP4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF439Q8NDP4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.14■□□□□ 0.81
ZNF439Q8NDP4 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.14■□□□□ 0.81
ZNF439Q8NDP4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF439Q8NDP4 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.14■□□□□ 0.81
ZNF439Q8NDP4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF439Q8NDP4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF439Q8NDP4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF439Q8NDP4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.13■□□□□ 0.81
ZNF439Q8NDP4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ZNF439Q8NDP4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF439Q8NDP4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF439Q8NDP4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ZNF439Q8NDP4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF439Q8NDP4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF439Q8NDP4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF439Q8NDP4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF439Q8NDP4 AL359258.2-201ENST00000564063 1566 ntBASIC20.12■□□□□ 0.81
ZNF439Q8NDP4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF439Q8NDP4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF439Q8NDP4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNF439Q8NDP4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF439Q8NDP4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF439Q8NDP4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF439Q8NDP4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF439Q8NDP4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.1■□□□□ 0.81
ZNF439Q8NDP4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF439Q8NDP4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF439Q8NDP4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF439Q8NDP4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF439Q8NDP4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF439Q8NDP4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF439Q8NDP4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF439Q8NDP4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF439Q8NDP4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF439Q8NDP4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
ZNF439Q8NDP4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF439Q8NDP4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF439Q8NDP4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF439Q8NDP4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF439Q8NDP4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ZNF439Q8NDP4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF439Q8NDP4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ZNF439Q8NDP4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ZNF439Q8NDP4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ZNF439Q8NDP4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF439Q8NDP4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF439Q8NDP4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF439Q8NDP4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF439Q8NDP4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms