Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT78Q8N1N4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
KRT78Q8N1N4 MIR4449-201ENST00000578365 66 ntBASIC23.64■■□□□ 1.37
KRT78Q8N1N4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
KRT78Q8N1N4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.62■■□□□ 1.37
KRT78Q8N1N4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.62■■□□□ 1.37
KRT78Q8N1N4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KRT78Q8N1N4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.61■■□□□ 1.37
KRT78Q8N1N4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT78Q8N1N4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.61■■□□□ 1.37
KRT78Q8N1N4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT78Q8N1N4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT78Q8N1N4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT78Q8N1N4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.6■■□□□ 1.37
KRT78Q8N1N4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KRT78Q8N1N4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
KRT78Q8N1N4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.59■■□□□ 1.37
KRT78Q8N1N4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.59■■□□□ 1.37
KRT78Q8N1N4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT78Q8N1N4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.58■■□□□ 1.37
KRT78Q8N1N4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.37
KRT78Q8N1N4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 AL359504.2-201ENST00000605506 1601 ntBASIC23.57■■□□□ 1.36
KRT78Q8N1N4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.57■■□□□ 1.36
KRT78Q8N1N4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 AC060814.1-201ENST00000554326 538 ntBASIC23.56■■□□□ 1.36
KRT78Q8N1N4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.56■■□□□ 1.36
KRT78Q8N1N4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT78Q8N1N4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT78Q8N1N4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT78Q8N1N4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT78Q8N1N4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT78Q8N1N4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT78Q8N1N4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT78Q8N1N4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KRT78Q8N1N4 AC022413.1-201ENST00000624602 984 ntBASIC23.53■■□□□ 1.36
KRT78Q8N1N4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT78Q8N1N4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
KRT78Q8N1N4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KRT78Q8N1N4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT78Q8N1N4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.5■■□□□ 1.35
KRT78Q8N1N4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT78Q8N1N4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT78Q8N1N4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.5■■□□□ 1.35
KRT78Q8N1N4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.49■■□□□ 1.35
KRT78Q8N1N4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms