Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.85■■□□□ 1.73
SYCE1Q8N0S2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
SYCE1Q8N0S2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SYCE1Q8N0S2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SYCE1Q8N0S2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SYCE1Q8N0S2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SYCE1Q8N0S2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.84■■□□□ 1.73
SYCE1Q8N0S2 AC010501.1-201ENST00000606270 1962 ntBASIC25.84■■□□□ 1.73
SYCE1Q8N0S2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
SYCE1Q8N0S2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SYCE1Q8N0S2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.83■■□□□ 1.73
SYCE1Q8N0S2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
SYCE1Q8N0S2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.82■■□□□ 1.72
SYCE1Q8N0S2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.82■■□□□ 1.72
SYCE1Q8N0S2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SYCE1Q8N0S2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
SYCE1Q8N0S2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SYCE1Q8N0S2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
SYCE1Q8N0S2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
SYCE1Q8N0S2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SYCE1Q8N0S2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.81■■□□□ 1.72
SYCE1Q8N0S2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SYCE1Q8N0S2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
SYCE1Q8N0S2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.81■■□□□ 1.72
SYCE1Q8N0S2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SYCE1Q8N0S2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SYCE1Q8N0S2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SYCE1Q8N0S2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SYCE1Q8N0S2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SYCE1Q8N0S2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.8■■□□□ 1.72
SYCE1Q8N0S2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
SYCE1Q8N0S2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.79■■□□□ 1.72
SYCE1Q8N0S2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SYCE1Q8N0S2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SYCE1Q8N0S2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.79■■□□□ 1.72
SYCE1Q8N0S2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SYCE1Q8N0S2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SYCE1Q8N0S2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SYCE1Q8N0S2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SYCE1Q8N0S2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.78■■□□□ 1.72
SYCE1Q8N0S2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SYCE1Q8N0S2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SYCE1Q8N0S2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SYCE1Q8N0S2 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.77■■□□□ 1.72
SYCE1Q8N0S2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.77■■□□□ 1.72
SYCE1Q8N0S2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SYCE1Q8N0S2 ERN1-208ENST00000606895 2068 ntBASIC25.76■■□□□ 1.71
SYCE1Q8N0S2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SYCE1Q8N0S2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SYCE1Q8N0S2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
SYCE1Q8N0S2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.76■■□□□ 1.71
SYCE1Q8N0S2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SYCE1Q8N0S2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SYCE1Q8N0S2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
SYCE1Q8N0S2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.75■■□□□ 1.71
SYCE1Q8N0S2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SYCE1Q8N0S2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
SYCE1Q8N0S2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.74■■□□□ 1.71
SYCE1Q8N0S2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.74■■□□□ 1.71
SYCE1Q8N0S2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
SYCE1Q8N0S2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.73■■□□□ 1.71
SYCE1Q8N0S2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.73■■□□□ 1.71
SYCE1Q8N0S2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SYCE1Q8N0S2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SYCE1Q8N0S2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SYCE1Q8N0S2 LINC01971-201ENST00000617888 1048 ntBASIC25.72■■□□□ 1.71
SYCE1Q8N0S2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SYCE1Q8N0S2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.72■■□□□ 1.71
SYCE1Q8N0S2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SYCE1Q8N0S2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SYCE1Q8N0S2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SYCE1Q8N0S2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.71
SYCE1Q8N0S2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SYCE1Q8N0S2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SYCE1Q8N0S2 AC008813.1-201ENST00000536597 885 ntBASIC25.7■■□□□ 1.7
SYCE1Q8N0S2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
SYCE1Q8N0S2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SYCE1Q8N0S2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SYCE1Q8N0S2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SYCE1Q8N0S2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SYCE1Q8N0S2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.69■■□□□ 1.7
SYCE1Q8N0S2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SYCE1Q8N0S2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.68■■□□□ 1.7
SYCE1Q8N0S2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.68■■□□□ 1.7
SYCE1Q8N0S2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SYCE1Q8N0S2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.68■■□□□ 1.7
SYCE1Q8N0S2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.68■■□□□ 1.7
SYCE1Q8N0S2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SYCE1Q8N0S2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SYCE1Q8N0S2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SYCE1Q8N0S2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.67■■□□□ 1.7
SYCE1Q8N0S2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SYCE1Q8N0S2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SYCE1Q8N0S2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SYCE1Q8N0S2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SYCE1Q8N0S2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.66■■□□□ 1.7
SYCE1Q8N0S2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.66■■□□□ 1.7
SYCE1Q8N0S2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SYCE1Q8N0S2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
SYCE1Q8N0S2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms