Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
XRN1Q8IZH2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC34.98■■■■□ 3.19
XRN1Q8IZH2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC34.98■■■■□ 3.19
XRN1Q8IZH2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
XRN1Q8IZH2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC34.97■■■■□ 3.19
XRN1Q8IZH2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC34.96■■■■□ 3.19
XRN1Q8IZH2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
XRN1Q8IZH2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
XRN1Q8IZH2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC34.96■■■■□ 3.19
XRN1Q8IZH2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC34.95■■■■□ 3.19
XRN1Q8IZH2 AP002414.2-202ENST00000590929 1450 ntBASIC34.95■■■■□ 3.19
XRN1Q8IZH2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC34.95■■■■□ 3.18
XRN1Q8IZH2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
XRN1Q8IZH2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC34.94■■■■□ 3.18
XRN1Q8IZH2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
XRN1Q8IZH2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
XRN1Q8IZH2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC34.94■■■■□ 3.18
XRN1Q8IZH2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
XRN1Q8IZH2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC34.91■■■■□ 3.18
XRN1Q8IZH2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC34.91■■■■□ 3.18
XRN1Q8IZH2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
XRN1Q8IZH2 AC018755.3-202ENST00000596210 929 ntBASIC34.9■■■■□ 3.18
XRN1Q8IZH2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
XRN1Q8IZH2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC34.89■■■■□ 3.18
XRN1Q8IZH2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
XRN1Q8IZH2 AL359504.2-201ENST00000605506 1601 ntBASIC34.89■■■■□ 3.18
XRN1Q8IZH2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC34.89■■■■□ 3.18
XRN1Q8IZH2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
XRN1Q8IZH2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC34.88■■■■□ 3.17
XRN1Q8IZH2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC34.88■■■■□ 3.17
XRN1Q8IZH2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
XRN1Q8IZH2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC34.87■■■■□ 3.17
XRN1Q8IZH2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
XRN1Q8IZH2 AC019171.1-201ENST00000601251 1056 ntBASIC34.87■■■■□ 3.17
XRN1Q8IZH2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
XRN1Q8IZH2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC34.86■■■■□ 3.17
XRN1Q8IZH2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC34.86■■■■□ 3.17
XRN1Q8IZH2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
XRN1Q8IZH2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC34.85■■■■□ 3.17
XRN1Q8IZH2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC34.84■■■■□ 3.17
XRN1Q8IZH2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
XRN1Q8IZH2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
XRN1Q8IZH2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC34.83■■■■□ 3.17
XRN1Q8IZH2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC34.83■■■■□ 3.17
XRN1Q8IZH2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
XRN1Q8IZH2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC34.83■■■■□ 3.17
XRN1Q8IZH2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
XRN1Q8IZH2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC34.82■■■■□ 3.16
XRN1Q8IZH2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC34.82■■■■□ 3.16
XRN1Q8IZH2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC34.81■■■■□ 3.16
XRN1Q8IZH2 ABCB10P3-201ENST00000561950 2166 ntBASIC34.8■■■■□ 3.16
XRN1Q8IZH2 Z92544.1-202ENST00000571933 1220 ntBASIC34.8■■■■□ 3.16
XRN1Q8IZH2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
XRN1Q8IZH2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
XRN1Q8IZH2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC34.79■■■■□ 3.16
XRN1Q8IZH2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC34.79■■■■□ 3.16
XRN1Q8IZH2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC34.79■■■■□ 3.16
XRN1Q8IZH2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC34.78■■■■□ 3.16
XRN1Q8IZH2 AC087393.1-201ENST00000582896 145 ntBASIC34.78■■■■□ 3.16
XRN1Q8IZH2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
XRN1Q8IZH2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC34.78■■■■□ 3.16
XRN1Q8IZH2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC34.78■■■■□ 3.16
XRN1Q8IZH2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
XRN1Q8IZH2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC34.77■■■■□ 3.16
XRN1Q8IZH2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC34.77■■■■□ 3.16
XRN1Q8IZH2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
XRN1Q8IZH2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC34.76■■■■□ 3.16
XRN1Q8IZH2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC34.76■■■■□ 3.16
XRN1Q8IZH2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
XRN1Q8IZH2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
XRN1Q8IZH2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
XRN1Q8IZH2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
XRN1Q8IZH2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
XRN1Q8IZH2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
XRN1Q8IZH2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
XRN1Q8IZH2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
XRN1Q8IZH2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
XRN1Q8IZH2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
XRN1Q8IZH2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
XRN1Q8IZH2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC34.71■■■■□ 3.15
XRN1Q8IZH2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
XRN1Q8IZH2 AL139393.2-201ENST00000608721 2025 ntBASIC34.7■■■■□ 3.15
XRN1Q8IZH2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
XRN1Q8IZH2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC34.7■■■■□ 3.14
XRN1Q8IZH2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
XRN1Q8IZH2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC34.69■■■■□ 3.14
XRN1Q8IZH2 GRAMD4P7-201ENST00000578182 1232 ntBASIC34.69■■■■□ 3.14
XRN1Q8IZH2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
XRN1Q8IZH2 AC239859.2-201ENST00000444165 318 ntBASIC34.69■■■■□ 3.14
XRN1Q8IZH2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC34.69■■■■□ 3.14
XRN1Q8IZH2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
XRN1Q8IZH2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC34.68■■■■□ 3.14
XRN1Q8IZH2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC34.68■■■■□ 3.14
XRN1Q8IZH2 WHAMMP3-201ENST00000611636 1609 ntBASIC34.67■■■■□ 3.14
XRN1Q8IZH2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
XRN1Q8IZH2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
XRN1Q8IZH2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
XRN1Q8IZH2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC34.67■■■■□ 3.14
XRN1Q8IZH2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC34.66■■■■□ 3.14
XRN1Q8IZH2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC34.66■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms