Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.72■■□□□ 1.87
NPAS4Q8IUM7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NPAS4Q8IUM7 PVT1_1.1-201ENST00000615125 194 ntBASIC26.72■■□□□ 1.87
NPAS4Q8IUM7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NPAS4Q8IUM7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NPAS4Q8IUM7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.71■■□□□ 1.87
NPAS4Q8IUM7 WHAMMP3-201ENST00000611636 1609 ntBASIC26.71■■□□□ 1.87
NPAS4Q8IUM7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NPAS4Q8IUM7 AC009299.2-201ENST00000482477 511 ntBASIC26.7■■□□□ 1.86
NPAS4Q8IUM7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
NPAS4Q8IUM7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NPAS4Q8IUM7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
NPAS4Q8IUM7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NPAS4Q8IUM7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NPAS4Q8IUM7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NPAS4Q8IUM7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NPAS4Q8IUM7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.69■■□□□ 1.86
NPAS4Q8IUM7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
NPAS4Q8IUM7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
NPAS4Q8IUM7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
NPAS4Q8IUM7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
NPAS4Q8IUM7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
NPAS4Q8IUM7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NPAS4Q8IUM7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.67■■□□□ 1.86
NPAS4Q8IUM7 MIR4508-201ENST00000584178 70 ntBASIC26.67■■□□□ 1.86
NPAS4Q8IUM7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
NPAS4Q8IUM7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
NPAS4Q8IUM7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.66■■□□□ 1.86
NPAS4Q8IUM7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
NPAS4Q8IUM7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.66■■□□□ 1.86
NPAS4Q8IUM7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.65■■□□□ 1.86
NPAS4Q8IUM7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NPAS4Q8IUM7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NPAS4Q8IUM7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.65■■□□□ 1.86
NPAS4Q8IUM7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
NPAS4Q8IUM7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NPAS4Q8IUM7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NPAS4Q8IUM7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.65■■□□□ 1.86
NPAS4Q8IUM7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NPAS4Q8IUM7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
NPAS4Q8IUM7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
NPAS4Q8IUM7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
NPAS4Q8IUM7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.63■■□□□ 1.85
NPAS4Q8IUM7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.63■■□□□ 1.85
NPAS4Q8IUM7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NPAS4Q8IUM7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.63■■□□□ 1.85
NPAS4Q8IUM7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.63■■□□□ 1.85
NPAS4Q8IUM7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
NPAS4Q8IUM7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
NPAS4Q8IUM7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NPAS4Q8IUM7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
NPAS4Q8IUM7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
NPAS4Q8IUM7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
NPAS4Q8IUM7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
NPAS4Q8IUM7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
NPAS4Q8IUM7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
NPAS4Q8IUM7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NPAS4Q8IUM7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NPAS4Q8IUM7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NPAS4Q8IUM7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.6■■□□□ 1.85
NPAS4Q8IUM7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.6■■□□□ 1.85
NPAS4Q8IUM7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.59■■□□□ 1.85
NPAS4Q8IUM7 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.59■■□□□ 1.85
NPAS4Q8IUM7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
NPAS4Q8IUM7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NPAS4Q8IUM7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NPAS4Q8IUM7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
NPAS4Q8IUM7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NPAS4Q8IUM7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NPAS4Q8IUM7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NPAS4Q8IUM7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
NPAS4Q8IUM7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NPAS4Q8IUM7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.56■■□□□ 1.84
NPAS4Q8IUM7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NPAS4Q8IUM7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NPAS4Q8IUM7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NPAS4Q8IUM7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NPAS4Q8IUM7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NPAS4Q8IUM7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
NPAS4Q8IUM7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.55■■□□□ 1.84
NPAS4Q8IUM7 AC103724.3-201ENST00000564481 992 ntBASIC26.55■■□□□ 1.84
NPAS4Q8IUM7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.55■■□□□ 1.84
NPAS4Q8IUM7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
NPAS4Q8IUM7 AC019171.1-201ENST00000601251 1056 ntBASIC26.54■■□□□ 1.84
NPAS4Q8IUM7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NPAS4Q8IUM7 AL031848.2-201ENST00000607670 837 ntBASIC26.53■■□□□ 1.84
NPAS4Q8IUM7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NPAS4Q8IUM7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.53■■□□□ 1.84
NPAS4Q8IUM7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NPAS4Q8IUM7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms