Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTTNQ86VV8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RTTNQ86VV8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.56■■□□□ 1.04
RTTNQ86VV8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTTNQ86VV8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTTNQ86VV8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTTNQ86VV8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RTTNQ86VV8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.55■■□□□ 1.04
RTTNQ86VV8 AL592295.1-201ENST00000400984 884 ntBASIC21.55■■□□□ 1.04
RTTNQ86VV8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTTNQ86VV8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.55■■□□□ 1.04
RTTNQ86VV8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.55■■□□□ 1.04
RTTNQ86VV8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTTNQ86VV8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RTTNQ86VV8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTTNQ86VV8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTTNQ86VV8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.53■■□□□ 1.04
RTTNQ86VV8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
RTTNQ86VV8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTTNQ86VV8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTTNQ86VV8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTTNQ86VV8 AC060814.1-201ENST00000554326 538 ntBASIC21.52■■□□□ 1.04
RTTNQ86VV8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RTTNQ86VV8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTTNQ86VV8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.52■■□□□ 1.04
RTTNQ86VV8 GPX1-201ENST00000419349 1106 ntBASIC21.51■■□□□ 1.03
RTTNQ86VV8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RTTNQ86VV8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTTNQ86VV8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTTNQ86VV8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.5■■□□□ 1.03
RTTNQ86VV8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTTNQ86VV8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTTNQ86VV8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.49■■□□□ 1.03
RTTNQ86VV8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTTNQ86VV8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTTNQ86VV8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTTNQ86VV8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTTNQ86VV8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTTNQ86VV8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTTNQ86VV8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.48■■□□□ 1.03
RTTNQ86VV8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RTTNQ86VV8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RTTNQ86VV8 AL359258.2-201ENST00000564063 1566 ntBASIC21.48■■□□□ 1.03
RTTNQ86VV8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RTTNQ86VV8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.48■■□□□ 1.03
RTTNQ86VV8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.48■■□□□ 1.03
RTTNQ86VV8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RTTNQ86VV8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.47■■□□□ 1.03
RTTNQ86VV8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTTNQ86VV8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTTNQ86VV8 RNF126P1-201ENST00000567452 1320 ntBASIC21.47■■□□□ 1.03
RTTNQ86VV8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTTNQ86VV8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTTNQ86VV8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTTNQ86VV8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RTTNQ86VV8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RTTNQ86VV8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.45■■□□□ 1.02
RTTNQ86VV8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RTTNQ86VV8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.45■■□□□ 1.02
RTTNQ86VV8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.45■■□□□ 1.02
RTTNQ86VV8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTTNQ86VV8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTTNQ86VV8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTTNQ86VV8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTTNQ86VV8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.44■■□□□ 1.02
RTTNQ86VV8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTTNQ86VV8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RTTNQ86VV8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RTTNQ86VV8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RTTNQ86VV8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTTNQ86VV8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTTNQ86VV8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTTNQ86VV8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTTNQ86VV8 AC092296.2-201ENST00000589470 999 ntBASIC21.43■■□□□ 1.02
RTTNQ86VV8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTTNQ86VV8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTTNQ86VV8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RTTNQ86VV8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTTNQ86VV8 AL033527.3-201ENST00000566366 1196 ntBASIC21.43■■□□□ 1.02
RTTNQ86VV8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTTNQ86VV8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.42■■□□□ 1.02
RTTNQ86VV8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.41■■□□□ 1.02
RTTNQ86VV8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTTNQ86VV8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.41■■□□□ 1.02
RTTNQ86VV8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTTNQ86VV8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTTNQ86VV8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTTNQ86VV8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms