Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.23■■□□□ 1.15
HIST3H2AQ7L7L0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HIST3H2AQ7L7L0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
HIST3H2AQ7L7L0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HIST3H2AQ7L7L0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST3H2AQ7L7L0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST3H2AQ7L7L0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST3H2AQ7L7L0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
HIST3H2AQ7L7L0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.22■■□□□ 1.15
HIST3H2AQ7L7L0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST3H2AQ7L7L0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.21■■□□□ 1.15
HIST3H2AQ7L7L0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HIST3H2AQ7L7L0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
HIST3H2AQ7L7L0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
HIST3H2AQ7L7L0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.21■■□□□ 1.15
HIST3H2AQ7L7L0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HIST3H2AQ7L7L0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HIST3H2AQ7L7L0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HIST3H2AQ7L7L0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
HIST3H2AQ7L7L0 HLA-V-202ENST00000446817 847 ntBASIC22.2■■□□□ 1.14
HIST3H2AQ7L7L0 CR559946.2-201ENST00000623684 991 ntBASIC22.2■■□□□ 1.14
HIST3H2AQ7L7L0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
HIST3H2AQ7L7L0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.2■■□□□ 1.14
HIST3H2AQ7L7L0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST3H2AQ7L7L0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.19■■□□□ 1.14
HIST3H2AQ7L7L0 MIR3648-2-201ENST00000581792 180 ntBASIC22.19■■□□□ 1.14
HIST3H2AQ7L7L0 MIR3648-1-201ENST00000615959 180 ntBASIC22.19■■□□□ 1.14
HIST3H2AQ7L7L0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST3H2AQ7L7L0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST3H2AQ7L7L0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HIST3H2AQ7L7L0 AC091060.1-201ENST00000623524 1766 ntBASIC22.18■■□□□ 1.14
HIST3H2AQ7L7L0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HIST3H2AQ7L7L0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.18■■□□□ 1.14
HIST3H2AQ7L7L0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.18■■□□□ 1.14
HIST3H2AQ7L7L0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HIST3H2AQ7L7L0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HIST3H2AQ7L7L0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.17■■□□□ 1.14
HIST3H2AQ7L7L0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
HIST3H2AQ7L7L0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HIST3H2AQ7L7L0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
HIST3H2AQ7L7L0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HIST3H2AQ7L7L0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HIST3H2AQ7L7L0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
HIST3H2AQ7L7L0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HIST3H2AQ7L7L0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HIST3H2AQ7L7L0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HIST3H2AQ7L7L0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.16■■□□□ 1.14
HIST3H2AQ7L7L0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.15■■□□□ 1.14
HIST3H2AQ7L7L0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HIST3H2AQ7L7L0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HIST3H2AQ7L7L0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
HIST3H2AQ7L7L0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HIST3H2AQ7L7L0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HIST3H2AQ7L7L0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HIST3H2AQ7L7L0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
HIST3H2AQ7L7L0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.14■■□□□ 1.13
HIST3H2AQ7L7L0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.14■■□□□ 1.13
HIST3H2AQ7L7L0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.14■■□□□ 1.13
HIST3H2AQ7L7L0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.14■■□□□ 1.13
HIST3H2AQ7L7L0 AC145676.1-201ENST00000514988 2004 ntBASIC22.13■■□□□ 1.13
HIST3H2AQ7L7L0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HIST3H2AQ7L7L0 AC016575.1-201ENST00000607026 382 ntBASIC22.13■■□□□ 1.13
HIST3H2AQ7L7L0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HIST3H2AQ7L7L0 AL359258.2-201ENST00000564063 1566 ntBASIC22.12■■□□□ 1.13
HIST3H2AQ7L7L0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HIST3H2AQ7L7L0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HIST3H2AQ7L7L0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.12■■□□□ 1.13
HIST3H2AQ7L7L0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
HIST3H2AQ7L7L0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HIST3H2AQ7L7L0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
HIST3H2AQ7L7L0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HIST3H2AQ7L7L0 AC092803.2-201ENST00000564287 1899 ntBASIC22.11■■□□□ 1.13
HIST3H2AQ7L7L0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
HIST3H2AQ7L7L0 AC126177.7-201ENST00000547904 679 ntBASIC22.11■■□□□ 1.13
HIST3H2AQ7L7L0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HIST3H2AQ7L7L0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HIST3H2AQ7L7L0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HIST3H2AQ7L7L0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
HIST3H2AQ7L7L0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HIST3H2AQ7L7L0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
HIST3H2AQ7L7L0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HIST3H2AQ7L7L0 MIR7108-201ENST00000614319 87 ntBASIC22.1■■□□□ 1.13
HIST3H2AQ7L7L0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.1■■□□□ 1.13
HIST3H2AQ7L7L0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.09■■□□□ 1.13
HIST3H2AQ7L7L0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
HIST3H2AQ7L7L0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
HIST3H2AQ7L7L0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HIST3H2AQ7L7L0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HIST3H2AQ7L7L0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HIST3H2AQ7L7L0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.09■■□□□ 1.13
HIST3H2AQ7L7L0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HIST3H2AQ7L7L0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HIST3H2AQ7L7L0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HIST3H2AQ7L7L0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HIST3H2AQ7L7L0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HIST3H2AQ7L7L0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HIST3H2AQ7L7L0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
HIST3H2AQ7L7L0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.08■■□□□ 1.12
HIST3H2AQ7L7L0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HIST3H2AQ7L7L0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms