Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN4Q6PJG9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN4Q6PJG9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
LRFN4Q6PJG9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN4Q6PJG9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRFN4Q6PJG9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN4Q6PJG9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.91■■□□□ 1.1
LRFN4Q6PJG9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRFN4Q6PJG9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.91■■□□□ 1.1
LRFN4Q6PJG9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LRFN4Q6PJG9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.9■■□□□ 1.1
LRFN4Q6PJG9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.9■■□□□ 1.1
LRFN4Q6PJG9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN4Q6PJG9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRFN4Q6PJG9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRFN4Q6PJG9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
LRFN4Q6PJG9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.89■■□□□ 1.09
LRFN4Q6PJG9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.89■■□□□ 1.09
LRFN4Q6PJG9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRFN4Q6PJG9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN4Q6PJG9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN4Q6PJG9 AP004609.3-201ENST00000610705 1884 ntBASIC21.88■■□□□ 1.09
LRFN4Q6PJG9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN4Q6PJG9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN4Q6PJG9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LRFN4Q6PJG9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.88■■□□□ 1.09
LRFN4Q6PJG9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.88■■□□□ 1.09
LRFN4Q6PJG9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN4Q6PJG9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN4Q6PJG9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN4Q6PJG9 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.87■■□□□ 1.09
LRFN4Q6PJG9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN4Q6PJG9 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.87■■□□□ 1.09
LRFN4Q6PJG9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LRFN4Q6PJG9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN4Q6PJG9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
LRFN4Q6PJG9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.87■■□□□ 1.09
LRFN4Q6PJG9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRFN4Q6PJG9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRFN4Q6PJG9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.86■■□□□ 1.09
LRFN4Q6PJG9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN4Q6PJG9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN4Q6PJG9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN4Q6PJG9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN4Q6PJG9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN4Q6PJG9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LRFN4Q6PJG9 AL359258.2-201ENST00000564063 1566 ntBASIC21.85■■□□□ 1.09
LRFN4Q6PJG9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN4Q6PJG9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRFN4Q6PJG9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRFN4Q6PJG9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.84■■□□□ 1.09
LRFN4Q6PJG9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRFN4Q6PJG9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRFN4Q6PJG9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRFN4Q6PJG9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRFN4Q6PJG9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.83■■□□□ 1.08
LRFN4Q6PJG9 AC142472.1-201ENST00000612013 1741 ntBASIC21.83■■□□□ 1.08
LRFN4Q6PJG9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LRFN4Q6PJG9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.82■■□□□ 1.08
LRFN4Q6PJG9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
LRFN4Q6PJG9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRFN4Q6PJG9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.82■■□□□ 1.08
LRFN4Q6PJG9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.82■■□□□ 1.08
LRFN4Q6PJG9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.81■■□□□ 1.08
LRFN4Q6PJG9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN4Q6PJG9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.79■■□□□ 1.08
LRFN4Q6PJG9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.79■■□□□ 1.08
LRFN4Q6PJG9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
LRFN4Q6PJG9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.79■■□□□ 1.08
LRFN4Q6PJG9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRFN4Q6PJG9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.78■■□□□ 1.08
LRFN4Q6PJG9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN4Q6PJG9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.78■■□□□ 1.08
LRFN4Q6PJG9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN4Q6PJG9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LRFN4Q6PJG9 MIR4449-201ENST00000578365 66 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms