Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.06■□□□□ 0.96
C11orf88Q6PI97 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C11orf88Q6PI97 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
C11orf88Q6PI97 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C11orf88Q6PI97 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
C11orf88Q6PI97 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C11orf88Q6PI97 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.04■□□□□ 0.96
C11orf88Q6PI97 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.04■□□□□ 0.96
C11orf88Q6PI97 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
C11orf88Q6PI97 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
C11orf88Q6PI97 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C11orf88Q6PI97 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C11orf88Q6PI97 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C11orf88Q6PI97 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C11orf88Q6PI97 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
C11orf88Q6PI97 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
C11orf88Q6PI97 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C11orf88Q6PI97 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
C11orf88Q6PI97 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
C11orf88Q6PI97 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
C11orf88Q6PI97 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.01■□□□□ 0.95
C11orf88Q6PI97 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21■□□□□ 0.95
C11orf88Q6PI97 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21■□□□□ 0.95
C11orf88Q6PI97 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21■□□□□ 0.95
C11orf88Q6PI97 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C11orf88Q6PI97 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
C11orf88Q6PI97 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21■□□□□ 0.95
C11orf88Q6PI97 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
C11orf88Q6PI97 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf88Q6PI97 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf88Q6PI97 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf88Q6PI97 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf88Q6PI97 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf88Q6PI97 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf88Q6PI97 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
C11orf88Q6PI97 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
C11orf88Q6PI97 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.98■□□□□ 0.95
C11orf88Q6PI97 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf88Q6PI97 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.98■□□□□ 0.95
C11orf88Q6PI97 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
C11orf88Q6PI97 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
C11orf88Q6PI97 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf88Q6PI97 AC127502.1-201ENST00000399971 1502 ntBASIC20.98■□□□□ 0.95
C11orf88Q6PI97 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf88Q6PI97 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
C11orf88Q6PI97 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.97■□□□□ 0.95
C11orf88Q6PI97 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.97■□□□□ 0.95
C11orf88Q6PI97 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf88Q6PI97 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
C11orf88Q6PI97 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf88Q6PI97 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf88Q6PI97 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.96■□□□□ 0.95
C11orf88Q6PI97 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.96■□□□□ 0.95
C11orf88Q6PI97 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.96■□□□□ 0.95
C11orf88Q6PI97 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf88Q6PI97 AC021231.2-201ENST00000594613 730 ntBASIC20.96■□□□□ 0.95
C11orf88Q6PI97 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf88Q6PI97 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.96■□□□□ 0.95
C11orf88Q6PI97 AP002414.2-202ENST00000590929 1450 ntBASIC20.95■□□□□ 0.94
C11orf88Q6PI97 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C11orf88Q6PI97 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
C11orf88Q6PI97 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
C11orf88Q6PI97 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
C11orf88Q6PI97 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf88Q6PI97 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C11orf88Q6PI97 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C11orf88Q6PI97 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.93■□□□□ 0.94
C11orf88Q6PI97 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C11orf88Q6PI97 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C11orf88Q6PI97 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C11orf88Q6PI97 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
C11orf88Q6PI97 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.92■□□□□ 0.94
C11orf88Q6PI97 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C11orf88Q6PI97 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.92■□□□□ 0.94
C11orf88Q6PI97 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C11orf88Q6PI97 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.92■□□□□ 0.94
C11orf88Q6PI97 MIR6090-201ENST00000622481 60 ntBASIC20.92■□□□□ 0.94
C11orf88Q6PI97 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms