Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL13A1Q5TAT6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.79■■■□□ 2.2
COL13A1Q5TAT6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL13A1Q5TAT6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
COL13A1Q5TAT6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL13A1Q5TAT6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL13A1Q5TAT6 MIR6821-201ENST00000617625 74 ntBASIC28.78■■■□□ 2.2
COL13A1Q5TAT6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.77■■■□□ 2.2
COL13A1Q5TAT6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
COL13A1Q5TAT6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.76■■■□□ 2.19
COL13A1Q5TAT6 MIR4466-201ENST00000606121 54 ntBASIC28.76■■■□□ 2.19
COL13A1Q5TAT6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.75■■■□□ 2.19
COL13A1Q5TAT6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.75■■■□□ 2.19
COL13A1Q5TAT6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.75■■■□□ 2.19
COL13A1Q5TAT6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL13A1Q5TAT6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL13A1Q5TAT6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL13A1Q5TAT6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.73■■■□□ 2.19
COL13A1Q5TAT6 AC106739.1-201ENST00000617035 715 ntBASIC28.73■■■□□ 2.19
COL13A1Q5TAT6 AL117332.1-201ENST00000622628 974 ntBASIC28.73■■■□□ 2.19
COL13A1Q5TAT6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL13A1Q5TAT6 PBX2P1-201ENST00000493219 1291 ntBASIC28.72■■■□□ 2.19
COL13A1Q5TAT6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
COL13A1Q5TAT6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
COL13A1Q5TAT6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.71■■■□□ 2.19
COL13A1Q5TAT6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
COL13A1Q5TAT6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.71■■■□□ 2.19
COL13A1Q5TAT6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.71■■■□□ 2.19
COL13A1Q5TAT6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
COL13A1Q5TAT6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
COL13A1Q5TAT6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.7■■■□□ 2.18
COL13A1Q5TAT6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.69■■■□□ 2.18
COL13A1Q5TAT6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.69■■■□□ 2.18
COL13A1Q5TAT6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.68■■■□□ 2.18
COL13A1Q5TAT6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
COL13A1Q5TAT6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.68■■■□□ 2.18
COL13A1Q5TAT6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.68■■■□□ 2.18
COL13A1Q5TAT6 AC087623.3-201ENST00000607047 1098 ntBASIC28.68■■■□□ 2.18
COL13A1Q5TAT6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COL13A1Q5TAT6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.67■■■□□ 2.18
COL13A1Q5TAT6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
COL13A1Q5TAT6 AC097381.1-201ENST00000429019 1296 ntBASIC28.67■■■□□ 2.18
COL13A1Q5TAT6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
COL13A1Q5TAT6 MIR3621-201ENST00000580529 85 ntBASIC28.67■■■□□ 2.18
COL13A1Q5TAT6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
COL13A1Q5TAT6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL13A1Q5TAT6 SUDS3P1-201ENST00000505831 966 ntBASIC28.66■■■□□ 2.18
COL13A1Q5TAT6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL13A1Q5TAT6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC28.66■■■□□ 2.18
COL13A1Q5TAT6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
COL13A1Q5TAT6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL13A1Q5TAT6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.65■■■□□ 2.18
COL13A1Q5TAT6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL13A1Q5TAT6 AL359258.2-201ENST00000564063 1566 ntBASIC28.64■■■□□ 2.18
COL13A1Q5TAT6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL13A1Q5TAT6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL13A1Q5TAT6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL13A1Q5TAT6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL13A1Q5TAT6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.63■■■□□ 2.17
COL13A1Q5TAT6 AL031432.3-201ENST00000607698 485 ntBASIC28.63■■■□□ 2.17
COL13A1Q5TAT6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL13A1Q5TAT6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL13A1Q5TAT6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.62■■■□□ 2.17
COL13A1Q5TAT6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.62■■■□□ 2.17
COL13A1Q5TAT6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.62■■■□□ 2.17
COL13A1Q5TAT6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL13A1Q5TAT6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.61■■■□□ 2.17
COL13A1Q5TAT6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.6■■■□□ 2.17
COL13A1Q5TAT6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
COL13A1Q5TAT6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
COL13A1Q5TAT6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL13A1Q5TAT6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.59■■■□□ 2.17
COL13A1Q5TAT6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
COL13A1Q5TAT6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.59■■■□□ 2.17
COL13A1Q5TAT6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
COL13A1Q5TAT6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.58■■■□□ 2.17
COL13A1Q5TAT6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
COL13A1Q5TAT6 AC010864.1-201ENST00000609407 1511 ntBASIC28.58■■■□□ 2.17
COL13A1Q5TAT6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.57■■■□□ 2.16
COL13A1Q5TAT6 MIR3960-201ENST00000583311 91 ntBASIC28.57■■■□□ 2.16
COL13A1Q5TAT6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
COL13A1Q5TAT6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.56■■■□□ 2.16
COL13A1Q5TAT6 AC127502.1-201ENST00000399971 1502 ntBASIC28.56■■■□□ 2.16
COL13A1Q5TAT6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC28.56■■■□□ 2.16
COL13A1Q5TAT6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.56■■■□□ 2.16
COL13A1Q5TAT6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.56■■■□□ 2.16
COL13A1Q5TAT6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
COL13A1Q5TAT6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.55■■■□□ 2.16
COL13A1Q5TAT6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
COL13A1Q5TAT6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL13A1Q5TAT6 AC105265.2-201ENST00000467189 838 ntBASIC28.54■■■□□ 2.16
COL13A1Q5TAT6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC28.54■■■□□ 2.16
COL13A1Q5TAT6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.53■■■□□ 2.16
COL13A1Q5TAT6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL13A1Q5TAT6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL13A1Q5TAT6 ID1-201ENST00000376105 1233 ntBASIC28.53■■■□□ 2.16
COL13A1Q5TAT6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.53■■■□□ 2.16
COL13A1Q5TAT6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.53■■■□□ 2.16
COL13A1Q5TAT6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
COL13A1Q5TAT6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms