Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SGO1Q5FBB7 AC145676.1-201ENST00000514988 2004 ntBASIC23.7■■□□□ 1.38
SGO1Q5FBB7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.7■■□□□ 1.38
SGO1Q5FBB7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SGO1Q5FBB7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SGO1Q5FBB7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.69■■□□□ 1.38
SGO1Q5FBB7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.69■■□□□ 1.38
SGO1Q5FBB7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SGO1Q5FBB7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.69■■□□□ 1.38
SGO1Q5FBB7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SGO1Q5FBB7 AC148477.6-201ENST00000623746 465 ntBASIC23.69■■□□□ 1.38
SGO1Q5FBB7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.69■■□□□ 1.38
SGO1Q5FBB7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SGO1Q5FBB7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.68■■□□□ 1.38
SGO1Q5FBB7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
SGO1Q5FBB7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SGO1Q5FBB7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
SGO1Q5FBB7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SGO1Q5FBB7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SGO1Q5FBB7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SGO1Q5FBB7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SGO1Q5FBB7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SGO1Q5FBB7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.67■■□□□ 1.38
SGO1Q5FBB7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SGO1Q5FBB7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SGO1Q5FBB7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SGO1Q5FBB7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
SGO1Q5FBB7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SGO1Q5FBB7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.66■■□□□ 1.38
SGO1Q5FBB7 MIR3648-2-201ENST00000581792 180 ntBASIC23.66■■□□□ 1.38
SGO1Q5FBB7 MIR3648-1-201ENST00000615959 180 ntBASIC23.66■■□□□ 1.38
SGO1Q5FBB7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SGO1Q5FBB7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.65■■□□□ 1.38
SGO1Q5FBB7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SGO1Q5FBB7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SGO1Q5FBB7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SGO1Q5FBB7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SGO1Q5FBB7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SGO1Q5FBB7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SGO1Q5FBB7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SGO1Q5FBB7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SGO1Q5FBB7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SGO1Q5FBB7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SGO1Q5FBB7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SGO1Q5FBB7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SGO1Q5FBB7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SGO1Q5FBB7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.63■■□□□ 1.37
SGO1Q5FBB7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SGO1Q5FBB7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SGO1Q5FBB7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.63■■□□□ 1.37
SGO1Q5FBB7 AL359258.2-201ENST00000564063 1566 ntBASIC23.63■■□□□ 1.37
SGO1Q5FBB7 AC016575.1-201ENST00000607026 382 ntBASIC23.63■■□□□ 1.37
SGO1Q5FBB7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SGO1Q5FBB7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SGO1Q5FBB7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SGO1Q5FBB7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.62■■□□□ 1.37
SGO1Q5FBB7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SGO1Q5FBB7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SGO1Q5FBB7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SGO1Q5FBB7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.6■■□□□ 1.37
SGO1Q5FBB7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SGO1Q5FBB7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SGO1Q5FBB7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.6■■□□□ 1.37
SGO1Q5FBB7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.6■■□□□ 1.37
SGO1Q5FBB7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
SGO1Q5FBB7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
SGO1Q5FBB7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SGO1Q5FBB7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SGO1Q5FBB7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SGO1Q5FBB7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SGO1Q5FBB7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.58■■□□□ 1.37
SGO1Q5FBB7 DUSP8P4-201ENST00000399538 1761 ntBASIC23.58■■□□□ 1.37
SGO1Q5FBB7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SGO1Q5FBB7 MIR7108-201ENST00000614319 87 ntBASIC23.58■■□□□ 1.37
SGO1Q5FBB7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SGO1Q5FBB7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SGO1Q5FBB7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.57■■□□□ 1.36
SGO1Q5FBB7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SGO1Q5FBB7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.57■■□□□ 1.36
SGO1Q5FBB7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.57■■□□□ 1.36
SGO1Q5FBB7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SGO1Q5FBB7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SGO1Q5FBB7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SGO1Q5FBB7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms