Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 ERS1YCR075C 783 nt5.85□□□□□ -1.47
RFU1Q08003 CTF8YHR191C 402 nt5.85□□□□□ -1.47
RFU1Q08003 MRPL19YNL185C 477 nt5.85□□□□□ -1.47
RFU1Q08003 YPR076WYPR076W 375 nt5.85□□□□□ -1.47
RFU1Q08003 TAH11YJR046W 1815 nt5.85□□□□□ -1.47
RFU1Q08003 PAC2YER007W 1557 nt5.84□□□□□ -1.47
RFU1Q08003 ATF1YOR377W 1578 nt5.84□□□□□ -1.47
RFU1Q08003 NUP84YDL116W 2181 nt5.84□□□□□ -1.47
RFU1Q08003 YGL102CYGL102C 429 nt5.84□□□□□ -1.47
RFU1Q08003 YLL056CYLL056C 897 nt5.84□□□□□ -1.47
RFU1Q08003 ZIM17YNL310C 525 nt5.84□□□□□ -1.47
RFU1Q08003 AAD14YNL331C 1131 nt5.84□□□□□ -1.47
RFU1Q08003 COS10YNR075W 1125 nt5.84□□□□□ -1.47
RFU1Q08003 MCP1YOR228C 909 nt5.84□□□□□ -1.47
RFU1Q08003 HBN1YCL026C-B 582 nt5.84□□□□□ -1.47
RFU1Q08003 CYB2YML054C 1776 nt5.84□□□□□ -1.47
RFU1Q08003 YIL077CYIL077C 963 nt5.83□□□□□ -1.48
RFU1Q08003 URA1YKL216W 945 nt5.83□□□□□ -1.48
RFU1Q08003 RPL31BYLR406C 342 nt5.83□□□□□ -1.48
RFU1Q08003 LGE1YPL055C 999 nt5.83□□□□□ -1.48
RFU1Q08003 SMX3YPR182W 261 nt5.83□□□□□ -1.48
RFU1Q08003 GFA1YKL104C 2154 nt5.83□□□□□ -1.48
RFU1Q08003 KNS1YLL019C 2214 nt5.82□□□□□ -1.48
RFU1Q08003 RAP1YNL216W 2484 nt5.82□□□□□ -1.48
RFU1Q08003 YEL020CYEL020C 1683 nt5.82□□□□□ -1.48
RFU1Q08003 PRI1YIR008C 1230 nt5.81□□□□□ -1.48
RFU1Q08003 YOL046CYOL046C 675 nt5.81□□□□□ -1.48
RFU1Q08003 SPE3YPR069C 882 nt5.81□□□□□ -1.48
RFU1Q08003 COX15YER141W 1461 nt5.81□□□□□ -1.48
RFU1Q08003 YBR241CYBR241C 1467 nt5.81□□□□□ -1.48
RFU1Q08003 ECM38YLR299W 1983 nt5.8□□□□□ -1.48
RFU1Q08003 EHD3YDR036C 1503 nt5.8□□□□□ -1.48
RFU1Q08003 PPH21YDL134C 1110 nt5.8□□□□□ -1.48
RFU1Q08003 YDL177CYDL177C 513 nt5.8□□□□□ -1.48
RFU1Q08003 MRPS28YDR337W 861 nt5.8□□□□□ -1.48
RFU1Q08003 YFL013W-AYFL013W-A 804 nt5.8□□□□□ -1.48
RFU1Q08003 AGX1YFL030W 1158 nt5.8□□□□□ -1.48
RFU1Q08003 YSC83YHR017W 1158 nt5.8□□□□□ -1.48
RFU1Q08003 NTG1YAL015C 1200 nt5.8□□□□□ -1.48
RFU1Q08003 URH1YDR400W 1023 nt5.79□□□□□ -1.48
RFU1Q08003 TRS31YDR472W 852 nt5.79□□□□□ -1.48
RFU1Q08003 RPL2BYIL018W 765 nt5.79□□□□□ -1.48
RFU1Q08003 NUP49YGL172W 1419 nt5.79□□□□□ -1.48
RFU1Q08003 ICP55YER078C 1536 nt5.79□□□□□ -1.48
RFU1Q08003 RIO1YOR119C 1455 nt5.78□□□□□ -1.48
RFU1Q08003 PCS60YBR222C 1632 nt5.78□□□□□ -1.48
RFU1Q08003 CBR1YIL043C 855 nt5.78□□□□□ -1.48
RFU1Q08003 SWD1YAR003W 1281 nt5.78□□□□□ -1.48
RFU1Q08003 TMA46YOR091W 1038 nt5.78□□□□□ -1.48
RFU1Q08003 ATP4YPL078C 735 nt5.78□□□□□ -1.48
RFU1Q08003 ASR1YPR093C 867 nt5.78□□□□□ -1.48
RFU1Q08003 KTR5YNL029C 1569 nt5.77□□□□□ -1.49
RFU1Q08003 NSE5YML023C 1671 nt5.77□□□□□ -1.49
RFU1Q08003 PPM2YOL141W 2088 nt5.77□□□□□ -1.49
RFU1Q08003 MSC3YLR219W 2187 nt5.77□□□□□ -1.49
RFU1Q08003 CCT3YJL014W 1605 nt5.77□□□□□ -1.49
RFU1Q08003 PLB3YOL011W 2061 nt5.76□□□□□ -1.49
RFU1Q08003 PHO3YBR092C 1404 nt5.76□□□□□ -1.49
RFU1Q08003 HED1YDR014W-A 489 nt5.76□□□□□ -1.49
RFU1Q08003 YKL018C-AYKL018C-A 300 nt5.76□□□□□ -1.49
RFU1Q08003 LDB7YBL006C 543 nt5.76□□□□□ -1.49
RFU1Q08003 SKN1YGR143W 2316 nt5.76□□□□□ -1.49
RFU1Q08003 BDF2YDL070W 1917 nt5.76□□□□□ -1.49
RFU1Q08003 RGD2YFL047W 2145 nt5.75□□□□□ -1.49
RFU1Q08003 COX16YJL003W 357 nt5.75□□□□□ -1.49
RFU1Q08003 ATG36YJL185C 882 nt5.75□□□□□ -1.49
RFU1Q08003 LIA1YJR070C 978 nt5.75□□□□□ -1.49
RFU1Q08003 GCN3YKR026C 918 nt5.75□□□□□ -1.49
RFU1Q08003 YNR014WYNR014W 639 nt5.75□□□□□ -1.49
RFU1Q08003 TRP5YGL026C 2124 nt5.75□□□□□ -1.49
RFU1Q08003 MSS1YMR023C 1581 nt5.75□□□□□ -1.49
RFU1Q08003 YHR020WYHR020W 2067 nt5.75□□□□□ -1.49
RFU1Q08003 ISC1YER019W 1434 nt5.74□□□□□ -1.49
RFU1Q08003 BIO3YNR058W 1443 nt5.74□□□□□ -1.49
RFU1Q08003 HOC1YJR075W 1191 nt5.74□□□□□ -1.49
RFU1Q08003 CSC1YLR241W 2349 nt5.74□□□□□ -1.49
RFU1Q08003 RSA4YCR072C 1548 nt5.74□□□□□ -1.49
RFU1Q08003 PPH22YDL188C 1134 nt5.73□□□□□ -1.49
RFU1Q08003 QNS1YHR074W 2145 nt5.73□□□□□ -1.49
RFU1Q08003 SEC62YPL094C 825 nt5.73□□□□□ -1.49
RFU1Q08003 GSH1YJL101C 2037 nt5.73□□□□□ -1.49
RFU1Q08003 SUB2YDL084W 1341 nt5.73□□□□□ -1.49
RFU1Q08003 MPH3YJR160C 1809 nt5.72□□□□□ -1.49
RFU1Q08003 YJL144WYJL144W 315 nt5.72□□□□□ -1.49
RFU1Q08003 IRC11YOR013W 471 nt5.72□□□□□ -1.49
RFU1Q08003 YLL066CYLL066C 3618 nt5.72□□□□□ -1.49
RFU1Q08003 CYS4YGR155W 1524 nt5.72□□□□□ -1.49
RFU1Q08003 EMW1YNL313C 2715 nt5.72□□□□□ -1.49
RFU1Q08003 PAT1YCR077C 2391 nt5.72□□□□□ -1.49
RFU1Q08003 DUG1YFR044C 1446 nt5.72□□□□□ -1.49
RFU1Q08003 ARP3YJR065C 1350 nt5.71□□□□□ -1.5
RFU1Q08003 GPD1YDL022W 1176 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)BtG(GCC)B 71 nt5.71□□□□□ -1.5
RFU1Q08003 SUF16tG(GCC)C 71 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)D1tG(GCC)D1 71 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)D2tG(GCC)D2 71 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)EtG(GCC)E 71 nt5.71□□□□□ -1.5
RFU1Q08003 SUF20tG(GCC)F1 71 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)F2tG(GCC)F2 71 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)G1tG(GCC)G1 71 nt5.71□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms