Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PDE4AP27815 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PDE4AP27815 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
PDE4AP27815 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
PDE4AP27815 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.75■■■□□ 2.51
PDE4AP27815 AP004609.3-201ENST00000610705 1884 ntBASIC30.75■■■□□ 2.51
PDE4AP27815 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PDE4AP27815 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PDE4AP27815 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.74■■■□□ 2.51
PDE4AP27815 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
PDE4AP27815 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
PDE4AP27815 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.74■■■□□ 2.51
PDE4AP27815 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
PDE4AP27815 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
PDE4AP27815 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PDE4AP27815 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PDE4AP27815 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
PDE4AP27815 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PDE4AP27815 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PDE4AP27815 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.72■■■□□ 2.51
PDE4AP27815 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.72■■■□□ 2.51
PDE4AP27815 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC30.72■■■□□ 2.51
PDE4AP27815 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.71■■■□□ 2.51
PDE4AP27815 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
PDE4AP27815 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PDE4AP27815 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PDE4AP27815 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PDE4AP27815 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.69■■■□□ 2.5
PDE4AP27815 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PDE4AP27815 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.69■■■□□ 2.5
PDE4AP27815 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.69■■■□□ 2.5
PDE4AP27815 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PDE4AP27815 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
PDE4AP27815 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PDE4AP27815 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDE4AP27815 WHAMMP3-201ENST00000611636 1609 ntBASIC30.67■■■□□ 2.5
PDE4AP27815 LINC01971-201ENST00000617888 1048 ntBASIC30.67■■■□□ 2.5
PDE4AP27815 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PDE4AP27815 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDE4AP27815 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDE4AP27815 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PDE4AP27815 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.66■■■□□ 2.5
PDE4AP27815 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
PDE4AP27815 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.65■■■□□ 2.5
PDE4AP27815 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.65■■■□□ 2.5
PDE4AP27815 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.65■■■□□ 2.5
PDE4AP27815 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC30.64■■■□□ 2.5
PDE4AP27815 ERN1-208ENST00000606895 2068 ntBASIC30.64■■■□□ 2.5
PDE4AP27815 LTK-203ENST00000453182 2412 ntTSL 2 BASIC30.64■■■□□ 2.5
PDE4AP27815 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
PDE4AP27815 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
PDE4AP27815 THRA-202ENST00000394121 2260 ntTSL 2 BASIC30.62■■■□□ 2.49
PDE4AP27815 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PDE4AP27815 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PDE4AP27815 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.62■■■□□ 2.49
PDE4AP27815 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PDE4AP27815 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PDE4AP27815 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDE4AP27815 DUX4L13-201ENST00000554103 1267 ntBASIC30.61■■■□□ 2.49
PDE4AP27815 DUX4L15-201ENST00000611059 1267 ntBASIC30.61■■■□□ 2.49
PDE4AP27815 DUX4L23-201ENST00000615195 1269 ntBASIC30.61■■■□□ 2.49
PDE4AP27815 DUX4L24-201ENST00000617576 1269 ntBASIC30.61■■■□□ 2.49
PDE4AP27815 DUX4L22-201ENST00000618238 1269 ntBASIC30.61■■■□□ 2.49
PDE4AP27815 DUX4L20-201ENST00000619712 1269 ntBASIC30.61■■■□□ 2.49
PDE4AP27815 DUX4L21-201ENST00000622058 1269 ntBASIC30.61■■■□□ 2.49
PDE4AP27815 DUX4L10-201ENST00000622460 1267 ntBASIC30.61■■■□□ 2.49
PDE4AP27815 DUX4L25-201ENST00000624915 1269 ntBASIC30.61■■■□□ 2.49
PDE4AP27815 AC142472.1-201ENST00000612013 1741 ntBASIC30.61■■■□□ 2.49
PDE4AP27815 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDE4AP27815 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDE4AP27815 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
PDE4AP27815 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
PDE4AP27815 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PDE4AP27815 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDE4AP27815 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.59■■■□□ 2.49
PDE4AP27815 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PDE4AP27815 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PDE4AP27815 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
PDE4AP27815 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
PDE4AP27815 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PDE4AP27815 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.58■■■□□ 2.49
PDE4AP27815 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
PDE4AP27815 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PDE4AP27815 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PDE4AP27815 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PDE4AP27815 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.57■■■□□ 2.48
PDE4AP27815 DUX4L11-201ENST00000611504 1267 ntBASIC30.56■■■□□ 2.48
PDE4AP27815 DUX4L12-201ENST00000614593 1267 ntBASIC30.56■■■□□ 2.48
PDE4AP27815 DUX4L14-201ENST00000621227 1267 ntBASIC30.56■■■□□ 2.48
PDE4AP27815 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC30.56■■■□□ 2.48
PDE4AP27815 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
PDE4AP27815 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.56■■■□□ 2.48
PDE4AP27815 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.55■■■□□ 2.48
PDE4AP27815 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PDE4AP27815 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PDE4AP27815 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PDE4AP27815 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
PDE4AP27815 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PDE4AP27815 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PDE4AP27815 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms