Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD28P10747 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD28P10747 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD28P10747 AL359504.2-201ENST00000605506 1601 ntBASIC19.22■□□□□ 0.67
CD28P10747 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD28P10747 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD28P10747 SPCS2P3-201ENST00000500401 656 ntBASIC19.21■□□□□ 0.67
CD28P10747 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.21■□□□□ 0.67
CD28P10747 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CD28P10747 BHLHE23-202ENST00000612929 1109 ntBASIC19.21■□□□□ 0.67
CD28P10747 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CD28P10747 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD28P10747 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD28P10747 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
CD28P10747 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
CD28P10747 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD28P10747 WHAMMP3-201ENST00000611636 1609 ntBASIC19.19■□□□□ 0.66
CD28P10747 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD28P10747 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.19■□□□□ 0.66
CD28P10747 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD28P10747 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD28P10747 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CD28P10747 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD28P10747 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CD28P10747 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD28P10747 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD28P10747 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD28P10747 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD28P10747 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD28P10747 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD28P10747 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CD28P10747 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.16■□□□□ 0.66
CD28P10747 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.16■□□□□ 0.66
CD28P10747 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD28P10747 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD28P10747 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CD28P10747 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CD28P10747 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD28P10747 AC010980.1-201ENST00000587192 1142 ntBASIC19.15■□□□□ 0.66
CD28P10747 MIR6765-201ENST00000614092 87 ntBASIC19.15■□□□□ 0.66
CD28P10747 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CD28P10747 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD28P10747 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD28P10747 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD28P10747 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CD28P10747 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD28P10747 AC139795.1-202ENST00000500444 432 ntBASIC19.14■□□□□ 0.65
CD28P10747 AC018755.3-202ENST00000596210 929 ntBASIC19.14■□□□□ 0.65
CD28P10747 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CD28P10747 AC139426.1-201ENST00000568218 2529 ntBASIC19.14■□□□□ 0.65
CD28P10747 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD28P10747 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD28P10747 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD28P10747 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD28P10747 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.13■□□□□ 0.65
CD28P10747 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.13■□□□□ 0.65
CD28P10747 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.13■□□□□ 0.65
CD28P10747 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD28P10747 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.13■□□□□ 0.65
CD28P10747 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.12■□□□□ 0.65
CD28P10747 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD28P10747 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD28P10747 KRT8P33-201ENST00000508125 1423 ntBASIC19.12■□□□□ 0.65
CD28P10747 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD28P10747 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.12■□□□□ 0.65
CD28P10747 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.12■□□□□ 0.65
CD28P10747 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD28P10747 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CD28P10747 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.12■□□□□ 0.65
CD28P10747 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD28P10747 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD28P10747 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.11■□□□□ 0.65
CD28P10747 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.11■□□□□ 0.65
CD28P10747 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.11■□□□□ 0.65
CD28P10747 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD28P10747 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD28P10747 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD28P10747 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD28P10747 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CD28P10747 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.09■□□□□ 0.65
CD28P10747 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.09■□□□□ 0.65
CD28P10747 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.09■□□□□ 0.65
CD28P10747 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD28P10747 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.09■□□□□ 0.65
CD28P10747 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD28P10747 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.09■□□□□ 0.65
CD28P10747 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD28P10747 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD28P10747 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.08■□□□□ 0.65
CD28P10747 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.08■□□□□ 0.64
CD28P10747 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD28P10747 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.08■□□□□ 0.64
CD28P10747 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.08■□□□□ 0.64
CD28P10747 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.08■□□□□ 0.64
CD28P10747 AC074183.2-201ENST00000623112 922 ntBASIC19.08■□□□□ 0.64
CD28P10747 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.08■□□□□ 0.64
CD28P10747 DRD5P2-201ENST00000421395 2012 ntBASIC19.08■□□□□ 0.64
CD28P10747 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CD28P10747 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.07■□□□□ 0.64
CD28P10747 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms