Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBCP0CG48 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBCP0CG48 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBCP0CG48 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBCP0CG48 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.38■■□□□ 1.01
UBCP0CG48 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.38■■□□□ 1.01
UBCP0CG48 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBCP0CG48 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.38■■□□□ 1.01
UBCP0CG48 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
UBCP0CG48 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
UBCP0CG48 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
UBCP0CG48 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBCP0CG48 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBCP0CG48 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
UBCP0CG48 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
UBCP0CG48 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBCP0CG48 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBCP0CG48 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBCP0CG48 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.36■■□□□ 1.01
UBCP0CG48 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
UBCP0CG48 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
UBCP0CG48 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.36■■□□□ 1.01
UBCP0CG48 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.36■■□□□ 1.01
UBCP0CG48 LINC01971-201ENST00000617888 1048 ntBASIC21.36■■□□□ 1.01
UBCP0CG48 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.36■■□□□ 1.01
UBCP0CG48 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBCP0CG48 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
UBCP0CG48 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.35■■□□□ 1.01
UBCP0CG48 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
UBCP0CG48 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBCP0CG48 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBCP0CG48 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBCP0CG48 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBCP0CG48 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.35■■□□□ 1.01
UBCP0CG48 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBCP0CG48 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBCP0CG48 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBCP0CG48 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBCP0CG48 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBCP0CG48 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.33■■□□□ 1.01
UBCP0CG48 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.33■■□□□ 1.01
UBCP0CG48 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
UBCP0CG48 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.33■■□□□ 1.01
UBCP0CG48 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBCP0CG48 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
UBCP0CG48 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBCP0CG48 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBCP0CG48 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBCP0CG48 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
UBCP0CG48 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.32■■□□□ 1
UBCP0CG48 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
UBCP0CG48 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
UBCP0CG48 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.32■■□□□ 1
UBCP0CG48 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBCP0CG48 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBCP0CG48 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.32■■□□□ 1
UBCP0CG48 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBCP0CG48 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBCP0CG48 AC008813.1-201ENST00000536597 885 ntBASIC21.31■■□□□ 1
UBCP0CG48 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
UBCP0CG48 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.31■■□□□ 1
UBCP0CG48 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBCP0CG48 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBCP0CG48 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBCP0CG48 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.3■■□□□ 1
UBCP0CG48 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.3■■□□□ 1
UBCP0CG48 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.3■■□□□ 1
UBCP0CG48 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.3■■□□□ 1
UBCP0CG48 AC010501.1-201ENST00000606270 1962 ntBASIC21.3■■□□□ 1
UBCP0CG48 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBCP0CG48 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBCP0CG48 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
UBCP0CG48 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.29■■□□□ 1
UBCP0CG48 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.29■■□□□ 1
UBCP0CG48 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.29■■□□□ 1
UBCP0CG48 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBCP0CG48 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBCP0CG48 DUX4L13-201ENST00000554103 1267 ntBASIC21.28■■□□□ 1
UBCP0CG48 DUX4L15-201ENST00000611059 1267 ntBASIC21.28■■□□□ 1
UBCP0CG48 DUX4L23-201ENST00000615195 1269 ntBASIC21.28■■□□□ 1
UBCP0CG48 DUX4L24-201ENST00000617576 1269 ntBASIC21.28■■□□□ 1
UBCP0CG48 DUX4L22-201ENST00000618238 1269 ntBASIC21.28■■□□□ 1
UBCP0CG48 DUX4L20-201ENST00000619712 1269 ntBASIC21.28■■□□□ 1
UBCP0CG48 DUX4L21-201ENST00000622058 1269 ntBASIC21.28■■□□□ 1
UBCP0CG48 DUX4L10-201ENST00000622460 1267 ntBASIC21.28■■□□□ 1
UBCP0CG48 DUX4L25-201ENST00000624915 1269 ntBASIC21.28■■□□□ 1
UBCP0CG48 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBCP0CG48 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBCP0CG48 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBCP0CG48 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBCP0CG48 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
UBCP0CG48 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.27■■□□□ 1
UBCP0CG48 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBCP0CG48 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBCP0CG48 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.26■□□□□ 0.99
UBCP0CG48 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
UBCP0CG48 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.26■□□□□ 0.99
UBCP0CG48 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBCP0CG48 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBCP0CG48 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms