Protein–RNA interactions for Protein: P0CB38

PABPC4L, Polyadenylate-binding protein 4-like, humanhuman

Known RBP Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4LP0CB38 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PABPC4LP0CB38 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PABPC4LP0CB38 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PABPC4LP0CB38 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PABPC4LP0CB38 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PABPC4LP0CB38 AC021231.2-201ENST00000594613 730 ntBASIC23.33■■□□□ 1.33
PABPC4LP0CB38 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.33■■□□□ 1.33
PABPC4LP0CB38 AC012676.1-201ENST00000574705 1949 ntBASIC23.33■■□□□ 1.32
PABPC4LP0CB38 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PABPC4LP0CB38 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.32■■□□□ 1.32
PABPC4LP0CB38 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PABPC4LP0CB38 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PABPC4LP0CB38 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PABPC4LP0CB38 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PABPC4LP0CB38 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PABPC4LP0CB38 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PABPC4LP0CB38 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PABPC4LP0CB38 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PABPC4LP0CB38 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PABPC4LP0CB38 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PABPC4LP0CB38 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PABPC4LP0CB38 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PABPC4LP0CB38 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PABPC4LP0CB38 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PABPC4LP0CB38 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.3■■□□□ 1.32
PABPC4LP0CB38 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PABPC4LP0CB38 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
PABPC4LP0CB38 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PABPC4LP0CB38 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PABPC4LP0CB38 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PABPC4LP0CB38 LINC00543-201ENST00000567234 1845 ntBASIC23.29■■□□□ 1.32
PABPC4LP0CB38 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PABPC4LP0CB38 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.28■■□□□ 1.32
PABPC4LP0CB38 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PABPC4LP0CB38 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.28■■□□□ 1.32
PABPC4LP0CB38 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PABPC4LP0CB38 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PABPC4LP0CB38 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PABPC4LP0CB38 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PABPC4LP0CB38 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.28■■□□□ 1.32
PABPC4LP0CB38 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PABPC4LP0CB38 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PABPC4LP0CB38 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PABPC4LP0CB38 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PABPC4LP0CB38 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PABPC4LP0CB38 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PABPC4LP0CB38 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PABPC4LP0CB38 ZNRF2P2-203ENST00000454624 420 ntBASIC23.26■■□□□ 1.31
PABPC4LP0CB38 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.26■■□□□ 1.31
PABPC4LP0CB38 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.26■■□□□ 1.31
PABPC4LP0CB38 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.26■■□□□ 1.31
PABPC4LP0CB38 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PABPC4LP0CB38 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PABPC4LP0CB38 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PABPC4LP0CB38 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PABPC4LP0CB38 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PABPC4LP0CB38 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PABPC4LP0CB38 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PABPC4LP0CB38 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PABPC4LP0CB38 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.24■■□□□ 1.31
PABPC4LP0CB38 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PABPC4LP0CB38 DUSP8P4-201ENST00000399538 1761 ntBASIC23.24■■□□□ 1.31
PABPC4LP0CB38 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.24■■□□□ 1.31
PABPC4LP0CB38 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PABPC4LP0CB38 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.23■■□□□ 1.31
PABPC4LP0CB38 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.23■■□□□ 1.31
PABPC4LP0CB38 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PABPC4LP0CB38 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PABPC4LP0CB38 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
PABPC4LP0CB38 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.22■■□□□ 1.31
PABPC4LP0CB38 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PABPC4LP0CB38 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PABPC4LP0CB38 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PABPC4LP0CB38 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PABPC4LP0CB38 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PABPC4LP0CB38 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PABPC4LP0CB38 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PABPC4LP0CB38 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PABPC4LP0CB38 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
PABPC4LP0CB38 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.21■■□□□ 1.31
PABPC4LP0CB38 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PABPC4LP0CB38 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.21■■□□□ 1.31
PABPC4LP0CB38 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.21■■□□□ 1.31
PABPC4LP0CB38 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PABPC4LP0CB38 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PABPC4LP0CB38 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PABPC4LP0CB38 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.2■■□□□ 1.3
PABPC4LP0CB38 MIR7108-201ENST00000614319 87 ntBASIC23.2■■□□□ 1.3
PABPC4LP0CB38 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.19■■□□□ 1.3
PABPC4LP0CB38 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PABPC4LP0CB38 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PABPC4LP0CB38 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PABPC4LP0CB38 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PABPC4LP0CB38 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.18■■□□□ 1.3
PABPC4LP0CB38 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PABPC4LP0CB38 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.18■■□□□ 1.3
PABPC4LP0CB38 AC110285.7-201ENST00000624417 1536 ntBASIC23.18■■□□□ 1.3
PABPC4LP0CB38 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PABPC4LP0CB38 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PABPC4LP0CB38 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms