Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN9O75954 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TSPAN9O75954 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN9O75954 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN9O75954 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.75■□□□□ 0.91
TSPAN9O75954 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN9O75954 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSPAN9O75954 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN9O75954 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN9O75954 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TSPAN9O75954 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN9O75954 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN9O75954 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN9O75954 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN9O75954 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TSPAN9O75954 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN9O75954 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN9O75954 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN9O75954 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN9O75954 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN9O75954 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TSPAN9O75954 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN9O75954 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN9O75954 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN9O75954 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN9O75954 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN9O75954 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.72■□□□□ 0.91
TSPAN9O75954 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN9O75954 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN9O75954 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN9O75954 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN9O75954 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN9O75954 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN9O75954 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.71■□□□□ 0.91
TSPAN9O75954 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN9O75954 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TSPAN9O75954 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN9O75954 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TSPAN9O75954 AC012676.1-201ENST00000574705 1949 ntBASIC20.7■□□□□ 0.91
TSPAN9O75954 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN9O75954 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
TSPAN9O75954 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.7■□□□□ 0.9
TSPAN9O75954 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN9O75954 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN9O75954 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN9O75954 AC079834.2-201ENST00000609776 1949 ntBASIC20.7■□□□□ 0.9
TSPAN9O75954 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN9O75954 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN9O75954 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN9O75954 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.69■□□□□ 0.9
TSPAN9O75954 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN9O75954 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN9O75954 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN9O75954 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.69■□□□□ 0.9
TSPAN9O75954 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TSPAN9O75954 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN9O75954 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TSPAN9O75954 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN9O75954 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TSPAN9O75954 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN9O75954 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TSPAN9O75954 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.68■□□□□ 0.9
TSPAN9O75954 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN9O75954 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.67■□□□□ 0.9
TSPAN9O75954 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.67■□□□□ 0.9
TSPAN9O75954 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TSPAN9O75954 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TSPAN9O75954 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN9O75954 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TSPAN9O75954 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.66■□□□□ 0.9
TSPAN9O75954 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.66■□□□□ 0.9
TSPAN9O75954 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.66■□□□□ 0.9
TSPAN9O75954 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TSPAN9O75954 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.65■□□□□ 0.9
TSPAN9O75954 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN9O75954 AC010864.1-201ENST00000609407 1511 ntBASIC20.65■□□□□ 0.9
TSPAN9O75954 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.65■□□□□ 0.9
TSPAN9O75954 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.65■□□□□ 0.9
TSPAN9O75954 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TSPAN9O75954 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.64■□□□□ 0.9
TSPAN9O75954 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TSPAN9O75954 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TSPAN9O75954 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN9O75954 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN9O75954 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN9O75954 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
TSPAN9O75954 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
TSPAN9O75954 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TSPAN9O75954 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN9O75954 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.63■□□□□ 0.89
TSPAN9O75954 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TSPAN9O75954 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN9O75954 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TSPAN9O75954 LINC00273-201ENST00000539813 1452 ntBASIC20.62■□□□□ 0.89
TSPAN9O75954 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TSPAN9O75954 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TSPAN9O75954 HSD17B1P1-201ENST00000590052 955 ntBASIC20.62■□□□□ 0.89
TSPAN9O75954 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TSPAN9O75954 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TSPAN9O75954 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms