Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRBV27A0A0K0K1C4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRBV27A0A0K0K1C4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV27A0A0K0K1C4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV27A0A0K0K1C4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV27A0A0K0K1C4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRBV27A0A0K0K1C4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV27A0A0K0K1C4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV27A0A0K0K1C4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV27A0A0K0K1C4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV27A0A0K0K1C4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV27A0A0K0K1C4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV27A0A0K0K1C4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV27A0A0K0K1C4 SUZ12P1-203ENST00000578195 985 ntBASIC17.29■□□□□ 0.36
TRBV27A0A0K0K1C4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV27A0A0K0K1C4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV27A0A0K0K1C4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV27A0A0K0K1C4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV27A0A0K0K1C4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV27A0A0K0K1C4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV27A0A0K0K1C4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV27A0A0K0K1C4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV27A0A0K0K1C4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV27A0A0K0K1C4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV27A0A0K0K1C4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRBV27A0A0K0K1C4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV27A0A0K0K1C4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV27A0A0K0K1C4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV27A0A0K0K1C4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.27■□□□□ 0.35
TRBV27A0A0K0K1C4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.27■□□□□ 0.35
TRBV27A0A0K0K1C4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV27A0A0K0K1C4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV27A0A0K0K1C4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV27A0A0K0K1C4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV27A0A0K0K1C4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV27A0A0K0K1C4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV27A0A0K0K1C4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV27A0A0K0K1C4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV27A0A0K0K1C4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV27A0A0K0K1C4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV27A0A0K0K1C4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV27A0A0K0K1C4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV27A0A0K0K1C4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV27A0A0K0K1C4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV27A0A0K0K1C4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV27A0A0K0K1C4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV27A0A0K0K1C4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV27A0A0K0K1C4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRBV27A0A0K0K1C4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV27A0A0K0K1C4 AC022211.4-201ENST00000625094 2161 ntBASIC17.23■□□□□ 0.35
TRBV27A0A0K0K1C4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV27A0A0K0K1C4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.23■□□□□ 0.35
TRBV27A0A0K0K1C4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV27A0A0K0K1C4 DUX4L28-201ENST00000623687 678 ntBASIC17.23■□□□□ 0.35
TRBV27A0A0K0K1C4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV27A0A0K0K1C4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV27A0A0K0K1C4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV27A0A0K0K1C4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV27A0A0K0K1C4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV27A0A0K0K1C4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV27A0A0K0K1C4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV27A0A0K0K1C4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV27A0A0K0K1C4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV27A0A0K0K1C4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRBV27A0A0K0K1C4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 AL139125.2-201ENST00000623134 1869 ntBASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV27A0A0K0K1C4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV27A0A0K0K1C4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TRBV27A0A0K0K1C4 AC138932.3-201ENST00000567634 1902 ntBASIC17.2■□□□□ 0.34
TRBV27A0A0K0K1C4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV27A0A0K0K1C4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV27A0A0K0K1C4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV27A0A0K0K1C4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV27A0A0K0K1C4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV27A0A0K0K1C4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV27A0A0K0K1C4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 MIR3665-201ENST00000578708 105 ntBASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV27A0A0K0K1C4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV27A0A0K0K1C4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms