Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV2A0A0B4J234 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV2A0A0B4J234 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV2A0A0B4J234 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
TRAV2A0A0B4J234 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV2A0A0B4J234 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV2A0A0B4J234 AP004609.3-201ENST00000610705 1884 ntBASIC18.45■□□□□ 0.54
TRAV2A0A0B4J234 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV2A0A0B4J234 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV2A0A0B4J234 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV2A0A0B4J234 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV2A0A0B4J234 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV2A0A0B4J234 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV2A0A0B4J234 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV2A0A0B4J234 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV2A0A0B4J234 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV2A0A0B4J234 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV2A0A0B4J234 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRAV2A0A0B4J234 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV2A0A0B4J234 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV2A0A0B4J234 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV2A0A0B4J234 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV2A0A0B4J234 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV2A0A0B4J234 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV2A0A0B4J234 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV2A0A0B4J234 AC092296.2-201ENST00000589470 999 ntBASIC18.41■□□□□ 0.54
TRAV2A0A0B4J234 AC022413.1-201ENST00000624602 984 ntBASIC18.41■□□□□ 0.54
TRAV2A0A0B4J234 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV2A0A0B4J234 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV2A0A0B4J234 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV2A0A0B4J234 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV2A0A0B4J234 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV2A0A0B4J234 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV2A0A0B4J234 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV2A0A0B4J234 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV2A0A0B4J234 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV2A0A0B4J234 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV2A0A0B4J234 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV2A0A0B4J234 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV2A0A0B4J234 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.39■□□□□ 0.54
TRAV2A0A0B4J234 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV2A0A0B4J234 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV2A0A0B4J234 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 ECEL1P2-201ENST00000461596 1295 ntBASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV2A0A0B4J234 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 AL157400.5-201ENST00000507624 621 ntBASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 AL359504.2-201ENST00000605506 1601 ntBASIC18.38■□□□□ 0.53
TRAV2A0A0B4J234 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV2A0A0B4J234 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV2A0A0B4J234 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV2A0A0B4J234 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV2A0A0B4J234 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
TRAV2A0A0B4J234 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV2A0A0B4J234 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.36■□□□□ 0.53
TRAV2A0A0B4J234 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAV2A0A0B4J234 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAV2A0A0B4J234 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV2A0A0B4J234 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 GPX1-201ENST00000419349 1106 ntBASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 AC025884.2-201ENST00000553429 711 ntBASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAV2A0A0B4J234 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms