Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-8A0A0A6YYG3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-8A0A0A6YYG3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-8A0A0A6YYG3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-8A0A0A6YYG3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-8A0A0A6YYG3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-8A0A0A6YYG3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV6-8A0A0A6YYG3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-8A0A0A6YYG3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV6-8A0A0A6YYG3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV6-8A0A0A6YYG3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV6-8A0A0A6YYG3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
TRBV6-8A0A0A6YYG3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.02■□□□□ 0.31
TRBV6-8A0A0A6YYG3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV6-8A0A0A6YYG3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-8A0A0A6YYG3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-8A0A0A6YYG3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV6-8A0A0A6YYG3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRBV6-8A0A0A6YYG3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-8A0A0A6YYG3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
TRBV6-8A0A0A6YYG3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-8A0A0A6YYG3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-8A0A0A6YYG3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-8A0A0A6YYG3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-8A0A0A6YYG3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-8A0A0A6YYG3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-8A0A0A6YYG3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-8A0A0A6YYG3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-8A0A0A6YYG3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-8A0A0A6YYG3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-8A0A0A6YYG3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-8A0A0A6YYG3 ABHD17AP4-201ENST00000411545 909 ntBASIC16.99■□□□□ 0.31
TRBV6-8A0A0A6YYG3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.99■□□□□ 0.31
TRBV6-8A0A0A6YYG3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-8A0A0A6YYG3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-8A0A0A6YYG3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-8A0A0A6YYG3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV6-8A0A0A6YYG3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-8A0A0A6YYG3 HLA-V-202ENST00000446817 847 ntBASIC16.98■□□□□ 0.31
TRBV6-8A0A0A6YYG3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-8A0A0A6YYG3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV6-8A0A0A6YYG3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRBV6-8A0A0A6YYG3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRBV6-8A0A0A6YYG3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRBV6-8A0A0A6YYG3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-8A0A0A6YYG3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-8A0A0A6YYG3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-8A0A0A6YYG3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-8A0A0A6YYG3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-8A0A0A6YYG3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 CR559946.2-201ENST00000623684 991 ntBASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 AL359258.2-201ENST00000564063 1566 ntBASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-8A0A0A6YYG3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.96■□□□□ 0.3
TRBV6-8A0A0A6YYG3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV6-8A0A0A6YYG3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-8A0A0A6YYG3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRBV6-8A0A0A6YYG3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-8A0A0A6YYG3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
TRBV6-8A0A0A6YYG3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-8A0A0A6YYG3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-8A0A0A6YYG3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-8A0A0A6YYG3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV6-8A0A0A6YYG3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV6-8A0A0A6YYG3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-8A0A0A6YYG3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-8A0A0A6YYG3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-8A0A0A6YYG3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-8A0A0A6YYG3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-8A0A0A6YYG3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRBV6-8A0A0A6YYG3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.93■□□□□ 0.3
TRBV6-8A0A0A6YYG3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV6-8A0A0A6YYG3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRBV6-8A0A0A6YYG3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 AC126177.7-201ENST00000547904 679 ntBASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 MIR3648-2-201ENST00000581792 180 ntBASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 MIR3648-1-201ENST00000615959 180 ntBASIC16.92■□□□□ 0.3
TRBV6-8A0A0A6YYG3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms