Protein–RNA interactions for Protein: A0A075B6L6

TRBV7-3, T-cell receptor beta variable 7-3 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-3A0A075B6L6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV7-3A0A075B6L6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV7-3A0A075B6L6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRBV7-3A0A075B6L6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV7-3A0A075B6L6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.5■□□□□ 0.39
TRBV7-3A0A075B6L6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV7-3A0A075B6L6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV7-3A0A075B6L6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV7-3A0A075B6L6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV7-3A0A075B6L6 AP004609.3-201ENST00000610705 1884 ntBASIC17.48■□□□□ 0.39
TRBV7-3A0A075B6L6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRBV7-3A0A075B6L6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV7-3A0A075B6L6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV7-3A0A075B6L6 AC145676.1-201ENST00000514988 2004 ntBASIC17.48■□□□□ 0.39
TRBV7-3A0A075B6L6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV7-3A0A075B6L6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV7-3A0A075B6L6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV7-3A0A075B6L6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV7-3A0A075B6L6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRBV7-3A0A075B6L6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV7-3A0A075B6L6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV7-3A0A075B6L6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV7-3A0A075B6L6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRBV7-3A0A075B6L6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV7-3A0A075B6L6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV7-3A0A075B6L6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRBV7-3A0A075B6L6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV7-3A0A075B6L6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-3A0A075B6L6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-3A0A075B6L6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-3A0A075B6L6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRBV7-3A0A075B6L6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV7-3A0A075B6L6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV7-3A0A075B6L6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV7-3A0A075B6L6 WHAMMP3-201ENST00000611636 1609 ntBASIC17.44■□□□□ 0.38
TRBV7-3A0A075B6L6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV7-3A0A075B6L6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.44■□□□□ 0.38
TRBV7-3A0A075B6L6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRBV7-3A0A075B6L6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRBV7-3A0A075B6L6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-3A0A075B6L6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-3A0A075B6L6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV7-3A0A075B6L6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-3A0A075B6L6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV7-3A0A075B6L6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV7-3A0A075B6L6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV7-3A0A075B6L6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-3A0A075B6L6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV7-3A0A075B6L6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-3A0A075B6L6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-3A0A075B6L6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-3A0A075B6L6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV7-3A0A075B6L6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV7-3A0A075B6L6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV7-3A0A075B6L6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV7-3A0A075B6L6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.41■□□□□ 0.38
TRBV7-3A0A075B6L6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV7-3A0A075B6L6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV7-3A0A075B6L6 AC142472.1-201ENST00000612013 1741 ntBASIC17.41■□□□□ 0.38
TRBV7-3A0A075B6L6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-3A0A075B6L6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-3A0A075B6L6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-3A0A075B6L6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-3A0A075B6L6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV7-3A0A075B6L6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-3A0A075B6L6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV7-3A0A075B6L6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV7-3A0A075B6L6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.4■□□□□ 0.38
TRBV7-3A0A075B6L6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRBV7-3A0A075B6L6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV7-3A0A075B6L6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV7-3A0A075B6L6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRBV7-3A0A075B6L6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV7-3A0A075B6L6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV7-3A0A075B6L6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV7-3A0A075B6L6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV7-3A0A075B6L6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV7-3A0A075B6L6 AC092803.2-201ENST00000564287 1899 ntBASIC17.38■□□□□ 0.37
TRBV7-3A0A075B6L6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV7-3A0A075B6L6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV7-3A0A075B6L6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV7-3A0A075B6L6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV7-3A0A075B6L6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV7-3A0A075B6L6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRBV7-3A0A075B6L6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV7-3A0A075B6L6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV7-3A0A075B6L6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV7-3A0A075B6L6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV7-3A0A075B6L6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV7-3A0A075B6L6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV7-3A0A075B6L6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV7-3A0A075B6L6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV7-3A0A075B6L6 LINC01971-201ENST00000617888 1048 ntBASIC17.36■□□□□ 0.37
TRBV7-3A0A075B6L6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV7-3A0A075B6L6 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV7-3A0A075B6L6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV7-3A0A075B6L6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV7-3A0A075B6L6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.35■□□□□ 0.37
TRBV7-3A0A075B6L6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.35■□□□□ 0.37
TRBV7-3A0A075B6L6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms