Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 DUTP2-201ENST00000519164 463 ntBASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 MTDHP4-201ENST00000600287 670 ntBASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 AC008735.5-201ENST00000623544 497 ntBASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1G3Q9Y6M4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CSNK1G3Q9Y6M4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CSNK1G3Q9Y6M4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CSNK1G3Q9Y6M4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.39■□□□□ 0.38
CSNK1G3Q9Y6M4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 AC107918.4-202ENST00000641623 219 ntBASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 AC093010.1-201ENST00000473625 1624 ntBASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1G3Q9Y6M4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 AC103564.2-201ENST00000432853 1299 ntBASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.38■□□□□ 0.37
CSNK1G3Q9Y6M4 POLD2P1-201ENST00000511220 997 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms